Search results for the GEO ID: GSE44663  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1088554 | GPL1261 |
|
Adult mouse control smooth muscle beta1 integrin wild type mesenteric arteries, 30M_ctrl
|
Adult mouse mesentery arteries, 7 weeks, control
|
strain/background: mixed (including but not limited to FVB, SVJ129 and C57BL/6)
genotype: loxP flanked beta1 integrin
tissue: mesenteric arteries
age: 7 weeks
treatment: 14 doses of 1mg tamoxifen
|
30M ctrl
Control mesenteric arteries from a cre negative beta1 integrin floxed mouse at 7 weeks of age after 14 doses of tamoxifen administered at 24h intervals from 5 weeks.
|
| Sample_geo_accession | GSM1088554
| | Sample_status | Public on Feb 26 2013
| | Sample_submission_date | Feb 25 2013
| | Sample_last_update_date | Feb 26 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were administered 1mg of tamoxifen per day for 14 days, after which mesenteric arteries were isolated and cleared of adipose and lymph tissue.
| | Sample_growth_protocol_ch1 | Animals were aged to 5 weeks before beginning induced deletion of beta1 integrin and aged an additional 2 weeks after initiation of deletion.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Roche MagNA Pure System.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion MessageAMO Premier kit, biotin labeled.
| | Sample_hyb_protocol | Affymetrix 645 hybridization oven for 16h.
| | Sample_scan_protocol | Affymetrix 3000 7G scanner.
| | Sample_data_processing | The data was processed using D-Chip. Normalized to Control 75M.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Kirsten,Ann,Turlo
| | Sample_contact_laboratory | M. Luisa Iruela-Arispe
| | Sample_contact_department | Molecular Cell and Developmental Biology
| | Sample_contact_institute | UCLA
| | Sample_contact_address | 621 Charles E Young Dr
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1088nnn/GSM1088554/suppl/GSM1088554_30M_ctrl.CEL.gz
| | Sample_series_id | GSE44663
| | Sample_data_row_count | 45037
| | |
|
GSM1088555 | GPL1261 |
|
Adult mouse control smooth muscle beta1 integrin wild type mesenteric arteries, 74M_ctrl
|
Adult mouse mesentery arteries, 7 weeks, control
|
strain/background: mixed (including but not limited to FVB, SVJ129 and C57BL/6)
genotype: loxP flanked beta1 integrin
tissue: mesenteric arteries
age: 7 weeks
treatment: 14 doses of 1mg tamoxifen
|
74M ctrl
Control mesenteric arteries from a cre negative beta1 integrin floxed mouse at 7 weeks of age after 14 doses of tamoxifen administered at 24h intervals from 5 weeks.
|
| Sample_geo_accession | GSM1088555
| | Sample_status | Public on Feb 26 2013
| | Sample_submission_date | Feb 25 2013
| | Sample_last_update_date | Feb 26 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were administered 1mg of tamoxifen per day for 14 days, after which mesenteric arteries were isolated and cleared of adipose and lymph tissue.
| | Sample_growth_protocol_ch1 | Animals were aged to 5 weeks before beginning induced deletion of beta1 integrin and aged an additional 2 weeks after initiation of deletion.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Roche MagNA Pure System.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion MessageAMO Premier kit, biotin labeled.
| | Sample_hyb_protocol | Affymetrix 645 hybridization oven for 16h.
| | Sample_scan_protocol | Affymetrix 3000 7G scanner.
| | Sample_data_processing | The data was processed using D-Chip. Normalized to Control 75M.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Kirsten,Ann,Turlo
| | Sample_contact_laboratory | M. Luisa Iruela-Arispe
| | Sample_contact_department | Molecular Cell and Developmental Biology
| | Sample_contact_institute | UCLA
| | Sample_contact_address | 621 Charles E Young Dr
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1088nnn/GSM1088555/suppl/GSM1088555_74Mbe.CEL.gz
| | Sample_series_id | GSE44663
| | Sample_data_row_count | 45037
| | |
|
GSM1088556 | GPL1261 |
|
Adult mouse control smooth muscle beta1 integrin wild type mesenteric arteries, 75M_ctrl
|
Adult mouse mesentery arteries, 7 weeks, control
|
strain/background: mixed (including but not limited to FVB, SVJ129 and C57BL/6)
genotype: loxP flanked beta1 integrin
tissue: mesenteric arteries
age: 7 weeks
treatment: 14 doses of 1mg tamoxifen
|
75M ctrl
Control mesenteric arteries from a cre negative beta1 integrin floxed mouse at 7 weeks of age after 14 doses of tamoxifen administered at 24h intervals from 5 weeks.
|
| Sample_geo_accession | GSM1088556
| | Sample_status | Public on Feb 26 2013
| | Sample_submission_date | Feb 25 2013
| | Sample_last_update_date | Feb 26 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were administered 1mg of tamoxifen per day for 14 days, after which mesenteric arteries were isolated and cleared of adipose and lymph tissue.
| | Sample_growth_protocol_ch1 | Animals were aged to 5 weeks before beginning induced deletion of beta1 integrin and aged an additional 2 weeks after initiation of deletion.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Roche MagNA Pure System.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion MessageAMO Premier kit, biotin labeled.
| | Sample_hyb_protocol | Affymetrix 645 hybridization oven for 16h.
| | Sample_scan_protocol | Affymetrix 3000 7G scanner.
| | Sample_data_processing | The data was processed using D-Chip. Normalized to Control 75M.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Kirsten,Ann,Turlo
| | Sample_contact_laboratory | M. Luisa Iruela-Arispe
| | Sample_contact_department | Molecular Cell and Developmental Biology
| | Sample_contact_institute | UCLA
| | Sample_contact_address | 621 Charles E Young Dr
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1088nnn/GSM1088556/suppl/GSM1088556_75M_ctrl.CEL.gz
| | Sample_series_id | GSE44663
| | Sample_data_row_count | 45037
| | |
|
GSM1088557 | GPL1261 |
|
Adult mouse smooth muscle beta1 integrin null mesenteric arteries, 72M_exp
|
Adult mouse mesentery arteries, 7 weeks, beta1 integrin knockout
|
strain/background: mixed (including but not limited to FVB, SVJ129 and C57BL/6)
genotype: sm22alphaCRE-positive loxP flanked beta1 integrin
tissue: mesenteric arteries
age: 7 weeks
treatment: 14 doses of 1mg tamoxifen
|
72M exp
Induced beta1 integrin null smooth muscle mesenteric arteries from induced beta1 integrin null smooth muscle sm22alphaCRE positive and beta1 integrin floxed mouse at 7 weeks of age after 14 doses of tamoxifen administered at 24h intervals from 5 weeks.
|
| Sample_geo_accession | GSM1088557
| | Sample_status | Public on Feb 26 2013
| | Sample_submission_date | Feb 25 2013
| | Sample_last_update_date | Feb 26 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were administered 1mg of tamoxifen per day for 14 days, after which mesenteric arteries were isolated and cleared of adipose and lymph tissue.
| | Sample_growth_protocol_ch1 | Animals were aged to 5 weeks before beginning induced deletion of beta1 integrin and aged an additional 2 weeks after initiation of deletion.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Roche MagNA Pure System.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion MessageAMO Premier kit, biotin labeled.
| | Sample_hyb_protocol | Affymetrix 645 hybridization oven for 16h.
| | Sample_scan_protocol | Affymetrix 3000 7G scanner.
| | Sample_data_processing | The data was processed using D-Chip. Normalized to Control 75M.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Kirsten,Ann,Turlo
| | Sample_contact_laboratory | M. Luisa Iruela-Arispe
| | Sample_contact_department | Molecular Cell and Developmental Biology
| | Sample_contact_institute | UCLA
| | Sample_contact_address | 621 Charles E Young Dr
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1088nnn/GSM1088557/suppl/GSM1088557_72M_expt.CEL.gz
| | Sample_series_id | GSE44663
| | Sample_data_row_count | 45037
| | |
|
GSM1088558 | GPL1261 |
|
Adult mouse smooth muscle beta1 integrin null mesenteric arteries, 73M_exp
|
Adult mouse mesentery arteries, 7 weeks, beta1 integrin knockout
|
strain/background: mixed (including but not limited to FVB, SVJ129 and C57BL/6)
genotype: sm22alphaCRE-positive loxP flanked beta1 integrin
tissue: mesenteric arteries
age: 7 weeks
treatment: 14 doses of 1mg tamoxifen
|
73M exp
Induced beta1 integrin null smooth muscle mesenteric arteries from induced beta1 integrin null smooth muscle sm22alphaCRE positive and beta1 integrin floxed mouse at 7 weeks of age after 14 doses of tamoxifen administered at 24h intervals from 5 weeks.
|
| Sample_geo_accession | GSM1088558
| | Sample_status | Public on Feb 26 2013
| | Sample_submission_date | Feb 25 2013
| | Sample_last_update_date | Feb 26 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were administered 1mg of tamoxifen per day for 14 days, after which mesenteric arteries were isolated and cleared of adipose and lymph tissue.
| | Sample_growth_protocol_ch1 | Animals were aged to 5 weeks before beginning induced deletion of beta1 integrin and aged an additional 2 weeks after initiation of deletion.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Roche MagNA Pure System.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion MessageAMO Premier kit, biotin labeled.
| | Sample_hyb_protocol | Affymetrix 645 hybridization oven for 16h.
| | Sample_scan_protocol | Affymetrix 3000 7G scanner.
| | Sample_data_processing | The data was processed using D-Chip. Normalized to Control 75M.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Kirsten,Ann,Turlo
| | Sample_contact_laboratory | M. Luisa Iruela-Arispe
| | Sample_contact_department | Molecular Cell and Developmental Biology
| | Sample_contact_institute | UCLA
| | Sample_contact_address | 621 Charles E Young Dr
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1088nnn/GSM1088558/suppl/GSM1088558_73Mbe.CEL.gz
| | Sample_series_id | GSE44663
| | Sample_data_row_count | 45037
| | |
|
GSM1088559 | GPL1261 |
|
Adult mouse smooth muscle beta1 integrin null mesenteric arteries, 86F_exp
|
Adult mouse mesentery arteries, 7 weeks, beta1 integrin knockout
|
strain/background: mixed (including but not limited to FVB, SVJ129 and C57BL/6)
genotype: sm22alphaCRE-positive loxP flanked beta1 integrin
tissue: mesenteric arteries
age: 7 weeks
treatment: 14 doses of 1mg tamoxifen
|
86F exp
Induced beta1 integrin null smooth muscle mesenteric arteries from induced beta1 integrin null smooth muscle sm22alphaCRE positive and beta1 integrin floxed mouse at 7 weeks of age after 14 doses of tamoxifen administered at 24h intervals from 5 weeks.
|
| Sample_geo_accession | GSM1088559
| | Sample_status | Public on Feb 26 2013
| | Sample_submission_date | Feb 25 2013
| | Sample_last_update_date | Feb 26 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Animals were administered 1mg of tamoxifen per day for 14 days, after which mesenteric arteries were isolated and cleared of adipose and lymph tissue.
| | Sample_growth_protocol_ch1 | Animals were aged to 5 weeks before beginning induced deletion of beta1 integrin and aged an additional 2 weeks after initiation of deletion.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNA was extracted using the Roche MagNA Pure System.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Ambion MessageAMO Premier kit, biotin labeled.
| | Sample_hyb_protocol | Affymetrix 645 hybridization oven for 16h.
| | Sample_scan_protocol | Affymetrix 3000 7G scanner.
| | Sample_data_processing | The data was processed using D-Chip. Normalized to Control 75M.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Kirsten,Ann,Turlo
| | Sample_contact_laboratory | M. Luisa Iruela-Arispe
| | Sample_contact_department | Molecular Cell and Developmental Biology
| | Sample_contact_institute | UCLA
| | Sample_contact_address | 621 Charles E Young Dr
| | Sample_contact_city | Los Angeles
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 90095
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1088nnn/GSM1088559/suppl/GSM1088559_86F_expt.CEL.gz
| | Sample_series_id | GSE44663
| | Sample_data_row_count | 45037
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
|
|
|
