Search results for the GEO ID: GSE45046 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1096567 | GPL570 |
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MCF7 cells DMSO treated replicate 1
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MCF7 cells untreated
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cell line: MCF7
treatment: DMSO
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Gene expression data from MCF7 cells treated with the novel anti-cancer agent NSC 59687
|
Sample_geo_accession | GSM1096567
| Sample_status | Public on Mar 13 2013
| Sample_submission_date | Mar 12 2013
| Sample_last_update_date | Mar 13 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | Cells were treated with 10microM NSC 59687 for 24 hours
| Sample_growth_protocol_ch1 | MCF7 cells grown in RPMI 1640 media + 10% FBS
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA isolated using Rneasy (Qiagen)
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | The RNA samples were submitted to Expression Analysis, Inc. (Durham, NC) for microarray analysis using the GeneChip® Human U133 Plus 2.0 Array (Affymetrix, Santa Clara, CA). Samples were labeled according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_hyb_protocol | Samples were hybridized according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_scan_protocol | Microarray images were captured using a GeneChip® 3000 Scanner
| Sample_data_processing | Affymetrix Expression console v1.3
| Sample_platform_id | GPL570
| Sample_contact_name | Luke,Hunter,Stockwin
| Sample_contact_email | stockwinl@mail.nih.gov
| Sample_contact_phone | 301-846-5431
| Sample_contact_department | DTP
| Sample_contact_institute | NCI Frederick
| Sample_contact_address | Ft. Detrick
| Sample_contact_city | Frederick
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21701
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096567/suppl/GSM1096567_MCF7_CON_1.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096567/suppl/GSM1096567_MCF7_CON_1.mas5.CHP.gz
| Sample_series_id | GSE45046
| Sample_data_row_count | 54675
| |
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GSM1096568 | GPL570 |
|
MCF7 cells DMSO treated replicate 2
|
MCF7 cells untreated
|
cell line: MCF7
treatment: DMSO
|
Gene expression data from MCF7 cells treated with the novel anti-cancer agent NSC 59687
|
Sample_geo_accession | GSM1096568
| Sample_status | Public on Mar 13 2013
| Sample_submission_date | Mar 12 2013
| Sample_last_update_date | Mar 13 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | Cells were treated with 10microM NSC 59687 for 24 hours
| Sample_growth_protocol_ch1 | MCF7 cells grown in RPMI 1640 media + 10% FBS
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA isolated using Rneasy (Qiagen)
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | The RNA samples were submitted to Expression Analysis, Inc. (Durham, NC) for microarray analysis using the GeneChip® Human U133 Plus 2.0 Array (Affymetrix, Santa Clara, CA). Samples were labeled according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_hyb_protocol | Samples were hybridized according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_scan_protocol | Microarray images were captured using a GeneChip® 3000 Scanner
| Sample_data_processing | Affymetrix Expression console v1.3
| Sample_platform_id | GPL570
| Sample_contact_name | Luke,Hunter,Stockwin
| Sample_contact_email | stockwinl@mail.nih.gov
| Sample_contact_phone | 301-846-5431
| Sample_contact_department | DTP
| Sample_contact_institute | NCI Frederick
| Sample_contact_address | Ft. Detrick
| Sample_contact_city | Frederick
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21701
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096568/suppl/GSM1096568_MCF7_CON_2.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096568/suppl/GSM1096568_MCF7_CON_2.mas5.CHP.gz
| Sample_series_id | GSE45046
| Sample_data_row_count | 54675
| |
|
GSM1096569 | GPL570 |
|
MCF7 cells 59687 treated replicate 1
|
MCF7 cells treated
|
cell line: MCF7
treatment: NSC 59687
|
Gene expression data from MCF7 cells treated with the novel anti-cancer agent NSC 59687
|
Sample_geo_accession | GSM1096569
| Sample_status | Public on Mar 13 2013
| Sample_submission_date | Mar 12 2013
| Sample_last_update_date | Mar 13 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | Cells were treated with 10microM NSC 59687 for 24 hours
| Sample_growth_protocol_ch1 | MCF7 cells grown in RPMI 1640 media + 10% FBS
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA isolated using Rneasy (Qiagen)
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | The RNA samples were submitted to Expression Analysis, Inc. (Durham, NC) for microarray analysis using the GeneChip® Human U133 Plus 2.0 Array (Affymetrix, Santa Clara, CA). Samples were labeled according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_hyb_protocol | Samples were hybridized according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_scan_protocol | Microarray images were captured using a GeneChip® 3000 Scanner
| Sample_data_processing | Affymetrix Expression console v1.3
| Sample_platform_id | GPL570
| Sample_contact_name | Luke,Hunter,Stockwin
| Sample_contact_email | stockwinl@mail.nih.gov
| Sample_contact_phone | 301-846-5431
| Sample_contact_department | DTP
| Sample_contact_institute | NCI Frederick
| Sample_contact_address | Ft. Detrick
| Sample_contact_city | Frederick
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21701
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096569/suppl/GSM1096569_MCF7_TRT_1.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096569/suppl/GSM1096569_MCF7_TRT_1.mas5.CHP.gz
| Sample_series_id | GSE45046
| Sample_data_row_count | 54675
| |
|
GSM1096570 | GPL570 |
|
MCF7 cells 59687 treated replicate 2
|
MCF7 cells treated
|
cell line: MCF7
treatment: NSC 59687
|
Gene expression data from MCF7 cells treated with the novel anti-cancer agent NSC 59687
|
Sample_geo_accession | GSM1096570
| Sample_status | Public on Mar 13 2013
| Sample_submission_date | Mar 12 2013
| Sample_last_update_date | Mar 13 2013
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | Cells were treated with 10microM NSC 59687 for 24 hours
| Sample_growth_protocol_ch1 | MCF7 cells grown in RPMI 1640 media + 10% FBS
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA isolated using Rneasy (Qiagen)
| Sample_label_ch1 | Biotin
| Sample_label_protocol_ch1 | The RNA samples were submitted to Expression Analysis, Inc. (Durham, NC) for microarray analysis using the GeneChip® Human U133 Plus 2.0 Array (Affymetrix, Santa Clara, CA). Samples were labeled according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_hyb_protocol | Samples were hybridized according to the "Affymetrix Technical Manual" (www.expressionanalysis.com)
| Sample_scan_protocol | Microarray images were captured using a GeneChip® 3000 Scanner
| Sample_data_processing | Affymetrix Expression console v1.3
| Sample_platform_id | GPL570
| Sample_contact_name | Luke,Hunter,Stockwin
| Sample_contact_email | stockwinl@mail.nih.gov
| Sample_contact_phone | 301-846-5431
| Sample_contact_department | DTP
| Sample_contact_institute | NCI Frederick
| Sample_contact_address | Ft. Detrick
| Sample_contact_city | Frederick
| Sample_contact_state | MD
| Sample_contact_zip/postal_code | 21701
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096570/suppl/GSM1096570_MCF7_TRT_2.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1096nnn/GSM1096570/suppl/GSM1096570_MCF7_TRT_2.mas5.CHP.gz
| Sample_series_id | GSE45046
| Sample_data_row_count | 54675
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