Search results for the GEO ID: GSE45618  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1110799 | GPL1261 |
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WT_MKP_BM_1
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Bone marrow MkP, biological rep01
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strain: C57BL/6
tissue: bone marrow
genotype/variation: wild type
|
Expression data from bone marrow megakaryocyte progenitors
|
| Sample_geo_accession | GSM1110799
| | Sample_status | Public on Mar 29 2013
| | Sample_submission_date | Mar 28 2013
| | Sample_last_update_date | Mar 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Harvested tissues were placed into single cell suspension and subsequently flow sorted for megakaryocyte progenitor population (lin-, Sca-1-, c-kit+, CD150+, CD41+).
| | Sample_growth_protocol_ch1 | Bone marrows were harvested from 12-18 weeks old adult mice and fetal livers were harvested at E13.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy Plus micro Kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to standard Affymetrix protocols.
| | Sample_hyb_protocol | According to standard Affymetrix protocols.
| | Sample_scan_protocol | According to standard Affymetrix protocols.
| | Sample_data_processing | Data were processed using Gene expression index (version 1.0.0) via Galaxy/Cistrome platform using MAS5 as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Andrew,Jonghan,Woo
| | Sample_contact_email | andrew.j.woo@uwa.edu.au
| | Sample_contact_department | School of Medicine and Pharmacology
| | Sample_contact_institute | University of Western Australia
| | Sample_contact_address | Level 6, MRF Bldg, Rear 50 Murray Street
| | Sample_contact_city | Perth
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 6000
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1110nnn/GSM1110799/suppl/GSM1110799_WT_MKP_BM_1.CEL.gz
| | Sample_series_id | GSE45618
| | Sample_data_row_count | 45101
| | |
|
GSM1110800 | GPL1261 |
|
WT_MKP_BM_2
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Bone marrow MkP, biological rep02
|
strain: C57BL/6
tissue: bone marrow
genotype/variation: wild type
|
Expression data from bone marrow megakaryocyte progenitors
|
| Sample_geo_accession | GSM1110800
| | Sample_status | Public on Mar 29 2013
| | Sample_submission_date | Mar 28 2013
| | Sample_last_update_date | Mar 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Harvested tissues were placed into single cell suspension and subsequently flow sorted for megakaryocyte progenitor population (lin-, Sca-1-, c-kit+, CD150+, CD41+).
| | Sample_growth_protocol_ch1 | Bone marrows were harvested from 12-18 weeks old adult mice and fetal livers were harvested at E13.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy Plus micro Kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to standard Affymetrix protocols.
| | Sample_hyb_protocol | According to standard Affymetrix protocols.
| | Sample_scan_protocol | According to standard Affymetrix protocols.
| | Sample_data_processing | Data were processed using Gene expression index (version 1.0.0) via Galaxy/Cistrome platform using MAS5 as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Andrew,Jonghan,Woo
| | Sample_contact_email | andrew.j.woo@uwa.edu.au
| | Sample_contact_department | School of Medicine and Pharmacology
| | Sample_contact_institute | University of Western Australia
| | Sample_contact_address | Level 6, MRF Bldg, Rear 50 Murray Street
| | Sample_contact_city | Perth
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 6000
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1110nnn/GSM1110800/suppl/GSM1110800_WT_MKP_BM_2.CEL.gz
| | Sample_series_id | GSE45618
| | Sample_data_row_count | 45101
| | |
|
GSM1110801 | GPL1261 |
|
WT_MKP_BM_3
|
Bone marrow MkP, biological rep03
|
strain: C57BL/6
tissue: bone marrow
genotype/variation: wild type
|
Expression data from bone marrow megakaryocyte progenitors
|
| Sample_geo_accession | GSM1110801
| | Sample_status | Public on Mar 29 2013
| | Sample_submission_date | Mar 28 2013
| | Sample_last_update_date | Mar 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Harvested tissues were placed into single cell suspension and subsequently flow sorted for megakaryocyte progenitor population (lin-, Sca-1-, c-kit+, CD150+, CD41+).
| | Sample_growth_protocol_ch1 | Bone marrows were harvested from 12-18 weeks old adult mice and fetal livers were harvested at E13.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy Plus micro Kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to standard Affymetrix protocols.
| | Sample_hyb_protocol | According to standard Affymetrix protocols.
| | Sample_scan_protocol | According to standard Affymetrix protocols.
| | Sample_data_processing | Data were processed using Gene expression index (version 1.0.0) via Galaxy/Cistrome platform using MAS5 as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Andrew,Jonghan,Woo
| | Sample_contact_email | andrew.j.woo@uwa.edu.au
| | Sample_contact_department | School of Medicine and Pharmacology
| | Sample_contact_institute | University of Western Australia
| | Sample_contact_address | Level 6, MRF Bldg, Rear 50 Murray Street
| | Sample_contact_city | Perth
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 6000
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1110nnn/GSM1110801/suppl/GSM1110801_WT_MKP_BM_3.CEL.gz
| | Sample_series_id | GSE45618
| | Sample_data_row_count | 45101
| | |
|
GSM1110802 | GPL1261 |
|
WT_MKP_FL_1
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Fetal liver MkP, biological rep01
|
strain: C57BL/6
tissue: fetal liver
genotype/variation: wild type
|
Expression data from fetal liver megakaryocyte progenitors
|
| Sample_geo_accession | GSM1110802
| | Sample_status | Public on Mar 29 2013
| | Sample_submission_date | Mar 28 2013
| | Sample_last_update_date | Mar 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Harvested tissues were placed into single cell suspension and subsequently flow sorted for megakaryocyte progenitor population (lin-, Sca-1-, c-kit+, CD150+, CD41+).
| | Sample_growth_protocol_ch1 | Bone marrows were harvested from 12-18 weeks old adult mice and fetal livers were harvested at E13.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy Plus micro Kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to standard Affymetrix protocols.
| | Sample_hyb_protocol | According to standard Affymetrix protocols.
| | Sample_scan_protocol | According to standard Affymetrix protocols.
| | Sample_data_processing | Data were processed using Gene expression index (version 1.0.0) via Galaxy/Cistrome platform using MAS5 as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Andrew,Jonghan,Woo
| | Sample_contact_email | andrew.j.woo@uwa.edu.au
| | Sample_contact_department | School of Medicine and Pharmacology
| | Sample_contact_institute | University of Western Australia
| | Sample_contact_address | Level 6, MRF Bldg, Rear 50 Murray Street
| | Sample_contact_city | Perth
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 6000
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1110nnn/GSM1110802/suppl/GSM1110802_WT_MKP_FL_1.CEL.gz
| | Sample_series_id | GSE45618
| | Sample_data_row_count | 45101
| | |
|
GSM1110803 | GPL1261 |
|
WT_MKP_FL_2
|
Fetal liver MkP, biological rep02
|
strain: C57BL/6
tissue: fetal liver
genotype/variation: wild type
|
Expression data from fetal liver megakaryocyte progenitors
|
| Sample_geo_accession | GSM1110803
| | Sample_status | Public on Mar 29 2013
| | Sample_submission_date | Mar 28 2013
| | Sample_last_update_date | Mar 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Harvested tissues were placed into single cell suspension and subsequently flow sorted for megakaryocyte progenitor population (lin-, Sca-1-, c-kit+, CD150+, CD41+).
| | Sample_growth_protocol_ch1 | Bone marrows were harvested from 12-18 weeks old adult mice and fetal livers were harvested at E13.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy Plus micro Kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to standard Affymetrix protocols.
| | Sample_hyb_protocol | According to standard Affymetrix protocols.
| | Sample_scan_protocol | According to standard Affymetrix protocols.
| | Sample_data_processing | Data were processed using Gene expression index (version 1.0.0) via Galaxy/Cistrome platform using MAS5 as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Andrew,Jonghan,Woo
| | Sample_contact_email | andrew.j.woo@uwa.edu.au
| | Sample_contact_department | School of Medicine and Pharmacology
| | Sample_contact_institute | University of Western Australia
| | Sample_contact_address | Level 6, MRF Bldg, Rear 50 Murray Street
| | Sample_contact_city | Perth
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 6000
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1110nnn/GSM1110803/suppl/GSM1110803_WT_MKP_FL_2.CEL.gz
| | Sample_series_id | GSE45618
| | Sample_data_row_count | 45101
| | |
|
GSM1110804 | GPL1261 |
|
WT_MKP_FL_3
|
Fetal liver MkP, biological rep03
|
strain: C57BL/6
tissue: fetal liver
genotype/variation: wild type
|
Expression data from fetal liver megakaryocyte progenitors
|
| Sample_geo_accession | GSM1110804
| | Sample_status | Public on Mar 29 2013
| | Sample_submission_date | Mar 28 2013
| | Sample_last_update_date | Mar 29 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Harvested tissues were placed into single cell suspension and subsequently flow sorted for megakaryocyte progenitor population (lin-, Sca-1-, c-kit+, CD150+, CD41+).
| | Sample_growth_protocol_ch1 | Bone marrows were harvested from 12-18 weeks old adult mice and fetal livers were harvested at E13.5
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using Qiagen RNeasy Plus micro Kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | According to standard Affymetrix protocols.
| | Sample_hyb_protocol | According to standard Affymetrix protocols.
| | Sample_scan_protocol | According to standard Affymetrix protocols.
| | Sample_data_processing | Data were processed using Gene expression index (version 1.0.0) via Galaxy/Cistrome platform using MAS5 as normalization method.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Andrew,Jonghan,Woo
| | Sample_contact_email | andrew.j.woo@uwa.edu.au
| | Sample_contact_department | School of Medicine and Pharmacology
| | Sample_contact_institute | University of Western Australia
| | Sample_contact_address | Level 6, MRF Bldg, Rear 50 Murray Street
| | Sample_contact_city | Perth
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 6000
| | Sample_contact_country | Australia
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1110nnn/GSM1110804/suppl/GSM1110804_WT_MKP_FL_3.CEL.gz
| | Sample_series_id | GSE45618
| | Sample_data_row_count | 45101
| | |
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