Search results for the GEO ID: GSE47065  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1144017 | GPL1261 |
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Newborn epidermis of dKO biological replicate 1
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: IR-/-, IGF-1R-/-
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144017
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144017/suppl/GSM1144017_07-39_ko_A.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
| | |
|
GSM1144018 | GPL1261 |
|
Newborn epidermis of dKO biological replicate 2
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: IR-/-, IGF-1R-/-
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144018
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144018/suppl/GSM1144018_07-39_ko_B.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
| | |
|
GSM1144019 | GPL1261 |
|
Newborn epidermis of dKO biological replicate 3
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: IR-/-, IGF-1R-/-
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144019
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144019/suppl/GSM1144019_07-39_ko_C.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
| | |
|
GSM1144020 | GPL1261 |
|
Newborn epidermis of dKO biological replicate 4
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: IR-/-, IGF-1R-/-
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144020
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144020/suppl/GSM1144020_07-39_ko_D.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
| | |
|
GSM1144021 | GPL1261 |
|
Newborn epidermis of ctrl biological replicate 1
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: wild type
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144021
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144021/suppl/GSM1144021_07-39_ctrl_A.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
| | |
|
GSM1144022 | GPL1261 |
|
Newborn epidermis of ctrl biological replicate 2
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: wild type
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144022
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144022/suppl/GSM1144022_07-39_ctrl_B.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
| | |
|
GSM1144023 | GPL1261 |
|
Newborn epidermis of ctrl biological replicate 3
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: wild type
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144023
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144023/suppl/GSM1144023_07-39_ctrl_C.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
| | |
|
GSM1144024 | GPL1261 |
|
Newborn epidermis of ctrl biological replicate 4
|
Newborn epidermis
|
strain: C57Bl/6
genotype/variation: wild type
|
Gene expression data from newborn mouse epidermis
|
| Sample_geo_accession | GSM1144024
| | Sample_status | Public on May 18 2013
| | Sample_submission_date | May 17 2013
| | Sample_last_update_date | May 18 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Epidermis was seperated from the dermis and RNA was isolated from control and dKO epidermis.
| | Sample_growth_protocol_ch1 | Newborn mice were collected
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on Affymetrix 430-2.0 platform. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner G2500A.
| | Sample_data_processing | The data were analyzed with MAS 5. The further-processed data are analyzed using Partek software.
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Mehmet,Deniz,Akyuz
| | Sample_contact_email | denizakyuz@gmail.com
| | Sample_contact_laboratory | Niessen
| | Sample_contact_department | Dermatology
| | Sample_contact_institute | Uni-Klinik Koln
| | Sample_contact_address | Robert Koch Str.21
| | Sample_contact_city | Koln
| | Sample_contact_state | NRW
| | Sample_contact_zip/postal_code | 50931
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1144nnn/GSM1144024/suppl/GSM1144024_07-39_ctrl_D.CEL.gz
| | Sample_series_id | GSE47065
| | Sample_data_row_count | 45101
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