Search results for the GEO ID: GSE4711  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM106408 | GPL339 |
|
Polysome fraction from 17day-old mouse testes, biological rep1
|
17d mouse, strain CD1
|
Polysome fraction from 17day-old mouse testes, biological rep1, 17d mouse, strain CD1
|
Polysome fraction from 17day-old mouse testes, biological rep1
|
| Sample_geo_accession | GSM106408
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106408/suppl/GSM106408.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106409 | GPL339 |
|
Polysome fraction from 17day-old mouse testes, biological rep2
|
17d mouse, strain CD1
|
Polysome fraction from 17day-old mouse testes, biological rep2, 17d mouse, strain CD1
|
Polysome fraction from 17day-old mouse testes, biological rep2
|
| Sample_geo_accession | GSM106409
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106409/suppl/GSM106409.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106410 | GPL339 |
|
Polysome fraction from 17day-old mouse testes, biological rep3
|
17d mouse, strain CD1
|
Polysome fraction from 17day-old mouse testes, biological rep3, 17d mouse, strain CD1
|
Polysome fraction from 17day-old mouse testes, biological rep3
|
| Sample_geo_accession | GSM106410
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106410/suppl/GSM106410.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106411 | GPL339 |
|
RNP fraction from 17day-old mouse testes, biological rep1
|
17d mouse, strain CD1
|
RNP fraction from 17day-old mouse testes, biological rep1, 17d mouse, strain CD1
|
RNP fraction from 17day-old mouse testes, biological rep1
|
| Sample_geo_accession | GSM106411
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106411/suppl/GSM106411.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106412 | GPL339 |
|
RNP fraction from 17day-old mouse testes, biological rep2
|
17d mouse, strain CD1
|
RNP fraction from 17day-old mouse testes, biological rep2, 17d mouse, strain CD1
|
RNP fraction from 17day-old mouse testes, biological rep2
|
| Sample_geo_accession | GSM106412
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106412/suppl/GSM106412.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106413 | GPL339 |
|
RNP fraction from 17day-old mouse testes, biological rep3
|
17d mouse, strain CD1
|
RNP fraction from 17day-old mouse testes, biological rep3, 17d mouse, strain CD1
|
RNP fraction from 17day-old mouse testes, biological rep3
|
| Sample_geo_accession | GSM106413
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106413/suppl/GSM106413.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106414 | GPL339 |
|
Polysome fraction from 22 day-old mouse testes, biological rep1
|
22d mouse, strain CD1
|
Polysome fraction from 22 day-old mouse testes, biological rep1, 22d mouse, strain CD1
|
Polysome fraction from 22day-old mouse testes, biological rep1
|
| Sample_geo_accession | GSM106414
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106414/suppl/GSM106414.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106415 | GPL339 |
|
Polysome fraction from 22 day-old mouse testes, biological rep2
|
22d mouse, strain CD1
|
Polysome fraction from 22 day-old mouse testes, biological rep2, 22d mouse, strain CD1
|
Polysome fraction from 22day-old mouse testes, biological rep2
|
| Sample_geo_accession | GSM106415
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106415/suppl/GSM106415.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106416 | GPL339 |
|
Polysome fraction from 22 day-old mouse testes, biological rep3
|
22d mouse, strain CD1
|
Polysome fraction from 22 day-old mouse testes, biological rep3, 22d mouse, strain CD1
|
Polysome fraction from 22day-old mouse testes, biological rep3
|
| Sample_geo_accession | GSM106416
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106416/suppl/GSM106416.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106417 | GPL339 |
|
RNP fraction from 22day-old mouse testes, biological rep1
|
22d mouse, strain CD1
|
RNP fraction from 22day-old mouse testes, biological rep1, 22d mouse, strain CD1
|
RNP fraction from 22day-old mouse testes, biological rep1
|
| Sample_geo_accession | GSM106417
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106417/suppl/GSM106417.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106418 | GPL339 |
|
RNP fraction from 22day-old mouse testes, biological rep2
|
22d mouse, strain CD1
|
RNP fraction from 22day-old mouse testes, biological rep2, 22d mouse, strain CD1
|
RNP fraction from 22day-old mouse testes, biological rep2
|
| Sample_geo_accession | GSM106418
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106418/suppl/GSM106418.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106419 | GPL339 |
|
RNP fraction from 22day-old mouse testes, biological rep3
|
22d mouse, strain CD1
|
RNP fraction from 22day-old mouse testes, biological rep3, 22d mouse, strain CD1
|
RNP fraction from 22day-old mouse testes, biological rep3
|
| Sample_geo_accession | GSM106419
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106419/suppl/GSM106419.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106420 | GPL339 |
|
Polysome fraction from adult mouse testes, biological rep1
|
adult mouse, strain CD1
|
Polysome fraction from adult mouse testes, biological rep1, adult mouse, strain CD1 !Sample_characteristics_ch1=,
|
Polysome fraction from adult mouse testes, biological rep1
|
| Sample_geo_accession | GSM106420
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106420/suppl/GSM106420.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106421 | GPL339 |
|
Polysome fraction from adult mouse testes, biological rep2
|
adult mouse, strain CD1
|
Polysome fraction from adult mouse testes, biological rep2, adult mouse, strain CD1 !Sample_characteristics_ch1=,
|
Polysome fraction from adult mouse testes, biological rep2
|
| Sample_geo_accession | GSM106421
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106421/suppl/GSM106421.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106422 | GPL339 |
|
Polysome fraction from adult mouse testes, biological rep3
|
adult mouse, strain CD1
|
Polysome fraction from adult mouse testes, biological rep3, adult mouse, strain CD1 !Sample_characteristics_ch1=,
|
Polysome fraction from adult mouse testes, biological rep3
|
| Sample_geo_accession | GSM106422
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 11-17 from total 17 as polysome-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106422/suppl/GSM106422.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106423 | GPL339 |
|
RNP fraction fromadult mouse testes, biological rep1
|
adult mouse, strain CD1
|
RNP fraction fromadult mouse testes, biological rep1, adult mouse, strain CD1 !Sample_characteristics_ch1=,
|
RNP fraction from adult mouse testes, biological rep1
|
| Sample_geo_accession | GSM106423
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106423/suppl/GSM106423.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106424 | GPL339 |
|
RNP fraction fromadult mouse testes, biological rep2
|
adult mouse, strain CD1
|
RNP fraction fromadult mouse testes, biological rep2, adult mouse, strain CD1 !Sample_characteristics_ch1=,
|
RNP fraction from adult mouse testes, biological rep2
|
| Sample_geo_accession | GSM106424
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106424/suppl/GSM106424.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
GSM106425 | GPL339 |
|
RNP fraction fromadult mouse testes, biological rep3
|
adult mouse, strain CD1
|
RNP fraction fromadult mouse testes, biological rep3, adult mouse, strain CD1 !Sample_characteristics_ch1=,
|
RNP fraction from adult mouse testes, biological rep3
|
| Sample_geo_accession | GSM106425
| | Sample_status | Public on May 15 2006
| | Sample_submission_date | Apr 24 2006
| | Sample_last_update_date | Apr 24 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | cytoplasmic extract of mouse testes were subjected to 10-30% sucrose gradient centrifugation.Total RNAs were extracted from fractions 2-8 from total 17 as RNP-associated fraction by Trizol.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip MOE 430A Mouse Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the GCS3000 scanner.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Norman,B,Hecht
| | Sample_contact_institute | University of Pennsylvania
| | Sample_contact_address | 421 Curie Blvd
| | Sample_contact_city | Philadelphia
| | Sample_contact_state | PA
| | Sample_contact_zip/postal_code | 19104
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM106nnn/GSM106425/suppl/GSM106425.CEL.gz
| | Sample_series_id | GSE4711
| | Sample_data_row_count | 22690
| | |
|
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