Search results for the GEO ID: GSE47196  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1146537 | GPL1261 |
|
Intestinal CCK-EGFP cells rep1
|
adult SW_intestinal CCK-EGFP cells
|
strain background: Swiss Webster (SW)
genotype/variation: CCK-EGFP transgenic
age: adult
tissue: intestine
cell type: FACS-sorted CCK-EGFP intestinal cells
|
enteroendocrine
|
| Sample_geo_accession | GSM1146537
| | Sample_status | Public on May 23 2013
| | Sample_submission_date | May 22 2013
| | Sample_last_update_date | May 23 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Intestinal cells were dissociated with enzymes and FACS purified
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Micro RNA kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen WT-oviation Pico RNA amplification kit (2008) was used to label the picogram levels of total RNA from the samples.
| | Sample_hyb_protocol | Affymetrix hybridization protocol (year 2008)
| | Sample_scan_protocol | Affymetrix scanning protocol (year 2008)
| | Sample_data_processing | GeneSpring GX (2008) was used to RMA normalized the data and perform analysis
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Rashmi,,Chandra
| | Sample_contact_department | Medicine/GI
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27710
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1146nnn/GSM1146537/suppl/GSM1146537_1261_51106_M430-2_14650_EGFPPOS.CEL.gz
| | Sample_series_id | GSE47196
| | Sample_data_row_count | 45101
| | |
|
GSM1146538 | GPL1261 |
|
Intestinal non-EGFP cells rep1
|
adult SW_intestinal non-EGFP cells
|
strain background: Swiss Webster (SW)
genotype/variation: CCK-EGFP transgenic
age: adult
tissue: intestine
cell type: non-EGFP intestinal cells (GFP negative)
|
enteroendocrine
|
| Sample_geo_accession | GSM1146538
| | Sample_status | Public on May 23 2013
| | Sample_submission_date | May 22 2013
| | Sample_last_update_date | May 23 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Intestinal cells were dissociated with enzymes and FACS purified
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Micro RNA kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen WT-oviation Pico RNA amplification kit (2008) was used to label the picogram levels of total RNA from the samples.
| | Sample_hyb_protocol | Affymetrix hybridization protocol (year 2008)
| | Sample_scan_protocol | Affymetrix scanning protocol (year 2008)
| | Sample_data_processing | GeneSpring GX (2008) was used to RMA normalized the data and perform analysis
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Rashmi,,Chandra
| | Sample_contact_department | Medicine/GI
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27710
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1146nnn/GSM1146538/suppl/GSM1146538_1261_51107_M430-2_14651_EGFPNEG.CEL.gz
| | Sample_series_id | GSE47196
| | Sample_data_row_count | 45101
| | |
|
GSM1146539 | GPL1261 |
|
Intestinal CCK-EGFP cells rep2
|
adult SW_intestinal CCK-EGFP cells
|
strain background: Swiss Webster (SW)
genotype/variation: CCK-EGFP transgenic
age: adult
tissue: intestine
cell type: FACS-sorted CCK-EGFP intestinal cells
|
enteroendocrine
|
| Sample_geo_accession | GSM1146539
| | Sample_status | Public on May 23 2013
| | Sample_submission_date | May 22 2013
| | Sample_last_update_date | May 23 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Intestinal cells were dissociated with enzymes and FACS purified
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Micro RNA kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen WT-oviation Pico RNA amplification kit (2008) was used to label the picogram levels of total RNA from the samples.
| | Sample_hyb_protocol | Affymetrix hybridization protocol (year 2008)
| | Sample_scan_protocol | Affymetrix scanning protocol (year 2008)
| | Sample_data_processing | GeneSpring GX (2008) was used to RMA normalized the data and perform analysis
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Rashmi,,Chandra
| | Sample_contact_department | Medicine/GI
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27710
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1146nnn/GSM1146539/suppl/GSM1146539_1261_51737_M430-2_14890_GFP+CCK4-8.CEL.gz
| | Sample_series_id | GSE47196
| | Sample_data_row_count | 45101
| | |
|
GSM1146540 | GPL1261 |
|
Intestinal non-EGFP cells rep2
|
adult SW_intestinal non-EGFP cells
|
strain background: Swiss Webster (SW)
genotype/variation: CCK-EGFP transgenic
age: adult
tissue: intestine
cell type: non-EGFP intestinal cells (GFP negative)
|
enteroendocrine
|
| Sample_geo_accession | GSM1146540
| | Sample_status | Public on May 23 2013
| | Sample_submission_date | May 22 2013
| | Sample_last_update_date | May 23 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Intestinal cells were dissociated with enzymes and FACS purified
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Micro RNA kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen WT-oviation Pico RNA amplification kit (2008) was used to label the picogram levels of total RNA from the samples.
| | Sample_hyb_protocol | Affymetrix hybridization protocol (year 2008)
| | Sample_scan_protocol | Affymetrix scanning protocol (year 2008)
| | Sample_data_processing | GeneSpring GX (2008) was used to RMA normalized the data and perform analysis
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Rashmi,,Chandra
| | Sample_contact_department | Medicine/GI
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27710
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1146nnn/GSM1146540/suppl/GSM1146540_1261_51738_M430-2_14891_GFPNEG4-8.CEL.gz
| | Sample_series_id | GSE47196
| | Sample_data_row_count | 45101
| | |
|
GSM1146541 | GPL1261 |
|
Intestinal non-EGFP cells rep3
|
adult SW_intestinal non-EGFP cells
|
strain background: Swiss Webster (SW)
genotype/variation: CCK-EGFP transgenic
age: adult
tissue: intestine
cell type: non-EGFP intestinal cells (GFP negative)
|
enteroendocrine
|
| Sample_geo_accession | GSM1146541
| | Sample_status | Public on May 23 2013
| | Sample_submission_date | May 22 2013
| | Sample_last_update_date | May 23 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Intestinal cells were dissociated with enzymes and FACS purified
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Micro RNA kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen WT-oviation Pico RNA amplification kit (2008) was used to label the picogram levels of total RNA from the samples.
| | Sample_hyb_protocol | Affymetrix hybridization protocol (year 2008)
| | Sample_scan_protocol | Affymetrix scanning protocol (year 2008)
| | Sample_data_processing | GeneSpring GX (2008) was used to RMA normalized the data and perform analysis
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Rashmi,,Chandra
| | Sample_contact_department | Medicine/GI
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27710
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1146nnn/GSM1146541/suppl/GSM1146541_1261_51739_M430-2_14892_GFPNEG4-9.CEL.gz
| | Sample_series_id | GSE47196
| | Sample_data_row_count | 45101
| | |
|
GSM1146542 | GPL1261 |
|
Intestinal CCK-EGFP cells rep3
|
adult SW_intestinal CCK-EGFP cells
|
strain background: Swiss Webster (SW)
genotype/variation: CCK-EGFP transgenic
age: adult
tissue: intestine
cell type: FACS-sorted CCK-EGFP intestinal cells
|
enteroendocrine
|
| Sample_geo_accession | GSM1146542
| | Sample_status | Public on May 23 2013
| | Sample_submission_date | May 22 2013
| | Sample_last_update_date | May 23 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Intestinal cells were dissociated with enzymes and FACS purified
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen Micro RNA kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Nugen WT-oviation Pico RNA amplification kit (2008) was used to label the picogram levels of total RNA from the samples.
| | Sample_hyb_protocol | Affymetrix hybridization protocol (year 2008)
| | Sample_scan_protocol | Affymetrix scanning protocol (year 2008)
| | Sample_data_processing | GeneSpring GX (2008) was used to RMA normalized the data and perform analysis
| | Sample_platform_id | GPL1261
| | Sample_contact_name | Rashmi,,Chandra
| | Sample_contact_department | Medicine/GI
| | Sample_contact_institute | Duke University Medical Center
| | Sample_contact_address | Research Drive
| | Sample_contact_city | Durham
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 27710
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1146nnn/GSM1146542/suppl/GSM1146542_1261_51740_M430-2_14893_GFP+CCK4-9.CEL.gz
| | Sample_series_id | GSE47196
| | Sample_data_row_count | 45101
| | |
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