Search results for the GEO ID: GSE47352  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1147749 | GPL570 |
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ccRCC_primary metastatic_rep01
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primary metastatic ccRCC
|
age: 52 yrs
gender: male
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: primary metastatic ccRCC
tnm stage: T2aN0M1
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M16
expression data from ccRCC sample
|
| Sample_geo_accession | GSM1147749
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147749/suppl/GSM1147749_M16_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147750 | GPL570 |
|
ccRCC_primary metastatic_rep02
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primary metastatic ccRCC
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age: 48 yrs
gender: male
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: primary metastatic ccRCC
tnm stage: T1bN0M1
|
Z2
expression data from ccRCC sample
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| Sample_geo_accession | GSM1147750
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147750/suppl/GSM1147750_Z2_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147751 | GPL570 |
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ccRCC_primary metastatic_rep04
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primary metastatic ccRCC
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age: 65 yrs
gender: male
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: primary metastatic ccRCC
tnm stage: T2aN0M1
|
M6
expression data from ccRCC sample
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| Sample_geo_accession | GSM1147751
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147751/suppl/GSM1147751_M6_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147752 | GPL570 |
|
ccRCC_primary metastatic_rep05
|
primary metastatic ccRCC
|
age: 52 yrs
gender: female
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: primary metastatic ccRCC
tnm stage: T1bN0M1
|
M4
expression data from ccRCC sample
|
| Sample_geo_accession | GSM1147752
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147752/suppl/GSM1147752_M4_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147753 | GPL570 |
|
ccRCC_primary non-metastatic_rep01
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non-metastatic ccRCC
|
age: 55 yrs
gender: male
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: non-metastatic ccRCC
tnm stage: T2aN0M0
|
D9
expression data from ccRCC sample
|
| Sample_geo_accession | GSM1147753
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147753/suppl/GSM1147753_D9_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147754 | GPL570 |
|
ccRCC_primary non-metastatic_rep02
|
non-metastatic ccRCC
|
age: 46 yrs
gender: male
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: non-metastatic ccRCC
tnm stage: T1bN0M0
|
A1
expression data from ccRCC sample
|
| Sample_geo_accession | GSM1147754
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147754/suppl/GSM1147754_A1_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147755 | GPL570 |
|
ccRCC_primary non-metastatic_rep03
|
non-metastatic ccRCC
|
age: 55 yrs
gender: male
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: non-metastatic ccRCC
tnm stage: T2aN0M0
|
D6
expression data from ccRCC sample
|
| Sample_geo_accession | GSM1147755
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147755/suppl/GSM1147755_D6_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147756 | GPL570 |
|
ccRCC_primary non-metastatic_rep04
|
non-metastatic ccRCC
|
age: 54 yrs
gender: female
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: non-metastatic ccRCC
tnm stage: T1bN0M0
|
D10
expression data from ccRCC sample
|
| Sample_geo_accession | GSM1147756
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147756/suppl/GSM1147756_D10_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
| | |
|
GSM1147757 | GPL570 |
|
ccRCC_primary non-metastatic_rep05
|
non-metastatic ccRCC
|
age: 59 yrs
gender: male
tissue: clear cell renal cell carcimoma (ccRCC)
tissue subtype: non-metastatic ccRCC
tnm stage: T1bN0M0
|
D11
expression data from ccRCC sample
|
| Sample_geo_accession | GSM1147757
| | Sample_status | Public on May 25 2013
| | Sample_submission_date | May 24 2013
| | Sample_last_update_date | May 28 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA was performed using the RNeasy Mini Kit (QIAGEN) according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Labeling, purification,and fragmentation were performed using GeneChip 3’ IVT Express Kit (Affymetrix, 901228) according to the manufacturer's instructions.
| | Sample_hyb_protocol | Hybridization, wash, and stain were performed using the GeneChip Hybridization, Wash, and Stain Kit (Affymetrix, 900720) according to the manufacturer's instructions.
| | Sample_scan_protocol | GeneChip Scanner 3000 7G (Affymetrix)
| | Sample_data_processing | Data were extracted, normalized, and summarized using the Microarray Suite version 5.0 (MAS 5.0) algorithm implemented in the Affymetrix Expression Console (v.1.2.1)
| | Sample_platform_id | GPL570
| | Sample_contact_name | xu,,zhang
| | Sample_contact_institute | PLA general hospital
| | Sample_contact_address | Fuxing road
| | Sample_contact_city | Beijing
| | Sample_contact_zip/postal_code | 100853
| | Sample_contact_country | China
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1147nnn/GSM1147757/suppl/GSM1147757_D11_HG-U133_Plus_2_.CEL.gz
| | Sample_series_id | GSE47352
| | Sample_data_row_count | 54613
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