Search results for the GEO ID: GSE47934  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1162733 | GPL570 |
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CD45+CD34+CD38- cells from engrafted Lin- cord blood located in trabecular bone area, biological rep 1
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Purified cells from engrafted cord blood cells
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tissue: cord blood
cell type: CD45+/CD34+/CD38-
|
Gene expression data from sorted CD45+CD34+CD38- CB cells
|
| Sample_geo_accession | GSM1162733
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162733/suppl/GSM1162733_HG_U133Plus_2_HSC_TBA_1.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
| | |
|
GSM1162734 | GPL570 |
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CD45+CD34+CD38- cells from engrafted Lin- cord blood located in trabecular bone area, biological rep 2
|
Purified cells from engrafted cord blood cells
|
tissue: cord blood
cell type: CD45+/CD34+/CD38-
|
Gene expression data from sorted CD45+CD34+CD38- CB cells
|
| Sample_geo_accession | GSM1162734
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162734/suppl/GSM1162734_HG_U133Plus_2_HSC_TBA_2.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
| | |
|
GSM1162735 | GPL570 |
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CD45+CD34+CD38- cells from engrafted Lin- cord blood located in long bone area, biological rep 1
|
Purified cells from engrafted cord blood cells
|
tissue: cord blood
cell type: CD45+/CD34+/CD38-
|
Gene expression data from sorted CD45+CD34+CD38- CB cells
|
| Sample_geo_accession | GSM1162735
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162735/suppl/GSM1162735_HG_U133Plus_2_HSC_LBA_1.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
| | |
|
GSM1162736 | GPL570 |
|
CD45+CD34+CD38- cells from engrafted Lin- cord blood located in long bone area, biological rep 2
|
Purified cells from engrafted cord blood cells
|
tissue: cord blood
cell type: CD45+/CD34+/CD38-
|
Gene expression data from sorted CD45+CD34+CD38- CB cells
|
| Sample_geo_accession | GSM1162736
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162736/suppl/GSM1162736_HG_U133Plus_2_HSC_LBA_2.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
| | |
|
GSM1162737 | GPL570 |
|
CD45+CD34+CD38+ cells from engrafted Lin- cord blood located in trabecular bone area, biological rep 1
|
Purified cells from engrafted cord blood cells
|
tissue: cord blood
cell type: CD45+/CD34+/CD38+
|
Gene expression data from sorted CD45+CD34+CD38+ CB cells
|
| Sample_geo_accession | GSM1162737
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162737/suppl/GSM1162737_HG_U133Plus_2_HPC_TBA_1.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
| | |
|
GSM1162738 | GPL570 |
|
CD45+CD34+CD38+ cells from engrafted Lin- cord blood located in trabecular bone area, biological rep 2
|
Purified cells from engrafted cord blood cells
|
tissue: cord blood
cell type: CD45+/CD34+/CD38+
|
Gene expression data from sorted CD45+CD34+CD38+ CB cells
|
| Sample_geo_accession | GSM1162738
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162738/suppl/GSM1162738_HG_U133Plus_2_HPC_TBA_2.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
| | |
|
GSM1162739 | GPL570 |
|
CD45+CD34+CD38+ cells from engrafted Lin- cord blood located in long bone area, biological rep 1
|
Purified cells from engrafted cord blood cells
|
tissue: cord blood
cell type: CD45+/CD34+/CD38+
|
Gene expression data from sorted CD45+CD34+CD38+ CB cells
|
| Sample_geo_accession | GSM1162739
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162739/suppl/GSM1162739_HG_U133Plus_2_HPC_LBA_1.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
| | |
|
GSM1162740 | GPL570 |
|
CD45+CD34+CD38+ cells from engrafted Lin- cord blood located in long bone area, biological rep 2
|
Purified cells from engrafted cord blood cells
|
tissue: cord blood
cell type: CD45+/CD34+/CD38+
|
Gene expression data from sorted CD45+CD34+CD38+ CB cells
|
| Sample_geo_accession | GSM1162740
| | Sample_status | Public on Aug 01 2013
| | Sample_submission_date | Jun 13 2013
| | Sample_last_update_date | Aug 01 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | Xenografted primary human tissue
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Extraction of total RNA using total RNA purification kit (Norgen Biotek, Canada) was performed according to the manufacturer's instructions. Total RNA was amplified following the standard protocol at London Regional Genomics Centre.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | In accordance with manufacturer's protocols
| | Sample_hyb_protocol | In accordance with manufacturer's protocols
| | Sample_scan_protocol | GeneChips were scanned using Affymetrix® Scanner 3000 7G.
| | Sample_data_processing | Data was normalized using Robust Multichip Averaging (RMA) algorithm and baseline transformation to the median of all samples using GeneSpring 12.5 software.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Mickie,,Bhatia
| | Sample_contact_email | mbhatia@mcmaster.ca
| | Sample_contact_department | Stem Cell and Cancer Research Institute (SCC-RI)
| | Sample_contact_institute | McMaster University
| | Sample_contact_address | 1200 Main Street West
| | Sample_contact_city | Hamilton
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | L8N 3Z5
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1162nnn/GSM1162740/suppl/GSM1162740_HG_U133Plus_2_HPC_LBA_2.CEL.gz
| | Sample_series_id | GSE47934
| | Sample_series_id | GSE47936
| | Sample_data_row_count | 54675
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