Search results for the GEO ID: GSE48882  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM1186307 | GPL339 |
|
C3H10-GFP1
|
C3H10 stimulated with GFP
|
cell line: C3H10T1/2
cell type: mesenchymal stem cell (MSC) line
transduction: GFP
|
Control
|
| Sample_geo_accession | GSM1186307
| | Sample_status | Public on Jul 16 2013
| | Sample_submission_date | Jul 15 2013
| | Sample_last_update_date | Jul 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Adenovirus expressing BMP9 or GFP.
| | Sample_growth_protocol_ch1 | Cultured in 0.5% FCS DMEM medium for 30h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA isolation kit.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol.
| | Sample_hyb_protocol | Affymetrix standard protocol.
| | Sample_scan_protocol | Affymetrix standard protocol.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Tong-Chuan,,He
| | Sample_contact_email | tche@uchicago.edu
| | Sample_contact_phone | 773-702-7169
| | Sample_contact_laboratory | Molecular Oncology Laboratory
| | Sample_contact_department | Department of Orthopaedic Surgery
| | Sample_contact_institute | The University of Chicago Medical Center
| | Sample_contact_address | 5841 South Maryland Avenue, MC 3079
| | Sample_contact_city | Chicago
| | Sample_contact_state | IL
| | Sample_contact_zip/postal_code | 60637
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1186nnn/GSM1186307/suppl/GSM1186307_C3H10-GFP1.CEL.gz
| | Sample_series_id | GSE48882
| | Sample_data_row_count | 22690
| | |
|
GSM1186308 | GPL339 |
|
C3H10-GFP2
|
C3H10 stimulated with GFP
|
cell line: C3H10T1/2
cell type: mesenchymal stem cell (MSC) line
transduction: GFP
|
Control
|
| Sample_geo_accession | GSM1186308
| | Sample_status | Public on Jul 16 2013
| | Sample_submission_date | Jul 15 2013
| | Sample_last_update_date | Jul 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Adenovirus expressing BMP9 or GFP.
| | Sample_growth_protocol_ch1 | Cultured in 0.5% FCS DMEM medium for 30h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA isolation kit.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol.
| | Sample_hyb_protocol | Affymetrix standard protocol.
| | Sample_scan_protocol | Affymetrix standard protocol.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Tong-Chuan,,He
| | Sample_contact_email | tche@uchicago.edu
| | Sample_contact_phone | 773-702-7169
| | Sample_contact_laboratory | Molecular Oncology Laboratory
| | Sample_contact_department | Department of Orthopaedic Surgery
| | Sample_contact_institute | The University of Chicago Medical Center
| | Sample_contact_address | 5841 South Maryland Avenue, MC 3079
| | Sample_contact_city | Chicago
| | Sample_contact_state | IL
| | Sample_contact_zip/postal_code | 60637
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1186nnn/GSM1186308/suppl/GSM1186308_C3H10-GFP2.CEL.gz
| | Sample_series_id | GSE48882
| | Sample_data_row_count | 22690
| | |
|
GSM1186309 | GPL339 |
|
C3H10-GFP3
|
C3H10 stimulated with GFP
|
cell line: C3H10T1/2
cell type: mesenchymal stem cell (MSC) line
transduction: GFP
|
Control
|
| Sample_geo_accession | GSM1186309
| | Sample_status | Public on Jul 16 2013
| | Sample_submission_date | Jul 15 2013
| | Sample_last_update_date | Jul 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Adenovirus expressing BMP9 or GFP.
| | Sample_growth_protocol_ch1 | Cultured in 0.5% FCS DMEM medium for 30h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA isolation kit.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol.
| | Sample_hyb_protocol | Affymetrix standard protocol.
| | Sample_scan_protocol | Affymetrix standard protocol.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Tong-Chuan,,He
| | Sample_contact_email | tche@uchicago.edu
| | Sample_contact_phone | 773-702-7169
| | Sample_contact_laboratory | Molecular Oncology Laboratory
| | Sample_contact_department | Department of Orthopaedic Surgery
| | Sample_contact_institute | The University of Chicago Medical Center
| | Sample_contact_address | 5841 South Maryland Avenue, MC 3079
| | Sample_contact_city | Chicago
| | Sample_contact_state | IL
| | Sample_contact_zip/postal_code | 60637
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1186nnn/GSM1186309/suppl/GSM1186309_C3H10-GFP3.CEL.gz
| | Sample_series_id | GSE48882
| | Sample_data_row_count | 22690
| | |
|
GSM1186310 | GPL339 |
|
C3H10-BMP9-1
|
C3H10 stimulated with BMP9
|
cell line: C3H10T1/2
cell type: mesenchymal stem cell (MSC) line
transduction: BMP9
|
Treatment
|
| Sample_geo_accession | GSM1186310
| | Sample_status | Public on Jul 16 2013
| | Sample_submission_date | Jul 15 2013
| | Sample_last_update_date | Jul 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Adenovirus expressing BMP9 or GFP.
| | Sample_growth_protocol_ch1 | Cultured in 0.5% FCS DMEM medium for 30h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA isolation kit.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol.
| | Sample_hyb_protocol | Affymetrix standard protocol.
| | Sample_scan_protocol | Affymetrix standard protocol.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Tong-Chuan,,He
| | Sample_contact_email | tche@uchicago.edu
| | Sample_contact_phone | 773-702-7169
| | Sample_contact_laboratory | Molecular Oncology Laboratory
| | Sample_contact_department | Department of Orthopaedic Surgery
| | Sample_contact_institute | The University of Chicago Medical Center
| | Sample_contact_address | 5841 South Maryland Avenue, MC 3079
| | Sample_contact_city | Chicago
| | Sample_contact_state | IL
| | Sample_contact_zip/postal_code | 60637
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1186nnn/GSM1186310/suppl/GSM1186310_C3H10-BMP9-1.CEL.gz
| | Sample_series_id | GSE48882
| | Sample_data_row_count | 22690
| | |
|
GSM1186311 | GPL339 |
|
C3H10-BMP9-2
|
C3H10 stimulated with BMP9
|
cell line: C3H10T1/2
cell type: mesenchymal stem cell (MSC) line
transduction: BMP9
|
Treatment
|
| Sample_geo_accession | GSM1186311
| | Sample_status | Public on Jul 16 2013
| | Sample_submission_date | Jul 15 2013
| | Sample_last_update_date | Jul 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Adenovirus expressing BMP9 or GFP.
| | Sample_growth_protocol_ch1 | Cultured in 0.5% FCS DMEM medium for 30h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA isolation kit.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol.
| | Sample_hyb_protocol | Affymetrix standard protocol.
| | Sample_scan_protocol | Affymetrix standard protocol.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Tong-Chuan,,He
| | Sample_contact_email | tche@uchicago.edu
| | Sample_contact_phone | 773-702-7169
| | Sample_contact_laboratory | Molecular Oncology Laboratory
| | Sample_contact_department | Department of Orthopaedic Surgery
| | Sample_contact_institute | The University of Chicago Medical Center
| | Sample_contact_address | 5841 South Maryland Avenue, MC 3079
| | Sample_contact_city | Chicago
| | Sample_contact_state | IL
| | Sample_contact_zip/postal_code | 60637
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1186nnn/GSM1186311/suppl/GSM1186311_C3H10-BMP9-2.CEL.gz
| | Sample_series_id | GSE48882
| | Sample_data_row_count | 22690
| | |
|
GSM1186312 | GPL339 |
|
C3H10-BMP9-3
|
C3H10 stimulated with BMP9
|
cell line: C3H10T1/2
cell type: mesenchymal stem cell (MSC) line
transduction: BMP9
|
Treatment
|
| Sample_geo_accession | GSM1186312
| | Sample_status | Public on Jul 16 2013
| | Sample_submission_date | Jul 15 2013
| | Sample_last_update_date | Jul 16 2013
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Adenovirus expressing BMP9 or GFP.
| | Sample_growth_protocol_ch1 | Cultured in 0.5% FCS DMEM medium for 30h.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNA isolation kit.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix standard protocol.
| | Sample_hyb_protocol | Affymetrix standard protocol.
| | Sample_scan_protocol | Affymetrix standard protocol.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL339
| | Sample_contact_name | Tong-Chuan,,He
| | Sample_contact_email | tche@uchicago.edu
| | Sample_contact_phone | 773-702-7169
| | Sample_contact_laboratory | Molecular Oncology Laboratory
| | Sample_contact_department | Department of Orthopaedic Surgery
| | Sample_contact_institute | The University of Chicago Medical Center
| | Sample_contact_address | 5841 South Maryland Avenue, MC 3079
| | Sample_contact_city | Chicago
| | Sample_contact_state | IL
| | Sample_contact_zip/postal_code | 60637
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM1186nnn/GSM1186312/suppl/GSM1186312_C3H10-BMP9-3.CEL.gz
| | Sample_series_id | GSE48882
| | Sample_data_row_count | 22690
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