Search results for the GEO ID: GSE5282  |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM75265 | GPL1355 |
|
EGF 4h replicate 1
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75265
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75265/suppl/GSM75265.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75267 | GPL1355 |
|
EGF 4h replicate 2
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75267
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75267/suppl/GSM75267.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75269 | GPL1355 |
|
Control for EGF 4h replicate 1
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75269
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75269/suppl/GSM75269.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75270 | GPL1355 |
|
Control for EGF 4h replicate 2
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75270
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75270/suppl/GSM75270.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75271 | GPL1355 |
|
Control for EGF 4h replicate 3
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75271
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75271/suppl/GSM75271.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75272 | GPL1355 |
|
Control for EGF 12h replicate 1
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75272
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75272/suppl/GSM75272.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75273 | GPL1355 |
|
Control for EGF 12h replicate 2
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75273
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75273/suppl/GSM75273.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75274 | GPL1355 |
|
Control for EGF 12h replicate 3
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75274
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75274/suppl/GSM75274.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75275 | GPL1355 |
|
EGF 12h replicate 1
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75275
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75275/suppl/GSM75275.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75276 | GPL1355 |
|
EGF 12h replicate 2
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75276
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75276/suppl/GSM75276.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
|
GSM75277 | GPL1355 |
|
EGF12h replicate 3
|
optic nerve head astrocyte
|
primary cell culture
|
control astrocytes
|
| Sample_geo_accession | GSM75277
| | Sample_status | Public on Jul 12 2006
| | Sample_submission_date | Sep 20 2005
| | Sample_last_update_date | Jul 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Primary astrocyte cultures from optic nerve head. Cells were lysed in separate groups in RLT buffer (Qiagen).Total RNA was extracted from the tissue lysate using an RNeasy kit (Qiagen).
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Approximately 3 µg of total RNA was processed to produce biotinylated cRNA targets.
| | Sample_hyb_protocol | standard Affymetrix procedures
| | Sample_scan_protocol | standard Affymetrix procedures
| | Sample_data_processing | Affymetrix Microarray Suite version 5.0
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bin,,Liu
| | Sample_contact_email | liu@vision.wustl.edu
| | Sample_contact_phone | 314-747-4183
| | Sample_contact_fax | 314-747-4211
| | Sample_contact_laboratory | Neufeld
| | Sample_contact_department | Ophthalmology
| | Sample_contact_institute | Washington University
| | Sample_contact_address | 660 S. Euclid
| | Sample_contact_city | St. Louis
| | Sample_contact_state | MO
| | Sample_contact_zip/postal_code | 63110
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM75nnn/GSM75277/suppl/GSM75277.CEL.gz
| | Sample_series_id | GSE5282
| | Sample_data_row_count | 31099
| | |
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