Search results for the GEO ID: GSE5809  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM136126 | GPL570 |
|
Endometrium control 0 hours TCM-3
|
uterus
|
Control endometrium 0 hours TCM-3
|
Control endometrium 0 hours TCM-3
|
| Sample_geo_accession | GSM136126
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136126/suppl/GSM136126.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136127 | GPL570 |
|
Endometrium control 0 hours TCM-4
|
uterus
|
Control endometrium 0 hours TCM-4
|
Control endometrium 0 hours TCM-4
|
| Sample_geo_accession | GSM136127
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136127/suppl/GSM136127.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136128 | GPL570 |
|
Endometrium control 0 hours TCM-13
|
uterus
|
Control endometrium 0 hours TCM-13
|
Control endometrium 0 hours TCM-13
|
| Sample_geo_accession | GSM136128
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days)
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136128/suppl/GSM136128.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136129 | GPL570 |
|
Endometrium in control conditioned medium for 3 hours TCM-5
|
uterus
|
Control conditioned medium endometrium 3 hours TCM-5
|
Control conditioned medium endometrium 3 hours TCM-5
|
| Sample_geo_accession | GSM136129
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days)+ control conditionned medium for 3 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136129/suppl/GSM136129.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136130 | GPL570 |
|
Endometrium in control conditioned medium for 3 hours TCM-7
|
uterus
|
Control conditioned medium endometrium 3 hours TCM-7
|
Control conditioned medium endometrium 3 hours TCM-7
|
| Sample_geo_accession | GSM136130
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + control conditionned medium for 3 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136130/suppl/GSM136130.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136131 | GPL570 |
|
Endometrium in control conditioned medium for 3 hours TCM-14
|
uterus
|
Control conditioned medium endometrium 3 hours TCM-14
|
Control conditioned medium endometrium 3 hours TCM-14
|
| Sample_geo_accession | GSM136131
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + control conditionned medium for 3 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136131/suppl/GSM136131.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136132 | GPL570 |
|
Endometrium in control conditioned medium for 12 hours TCM-9
|
uterus
|
Control conditioned medium endometrium 12 hours TCM-9
|
Control conditioned medium endometrium 12 hours TCM-9
|
| Sample_geo_accession | GSM136132
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + control conditionned medium for 12 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136132/suppl/GSM136132.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136133 | GPL570 |
|
Endometrium in control conditioned medium for 12 hours TCM-11
|
uterus
|
Control conditioned medium endometrium 12 hours TCM-11
|
Control conditioned medium endometrium 12 hours TCM-11
|
| Sample_geo_accession | GSM136133
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + control conditionned medium for 12 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136133/suppl/GSM136133.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136134 | GPL570 |
|
Endometrium in control conditioned medium for 12 hours TCM-15
|
uterus
|
Control conditioned medium endometrium 12 hours TCM-15
|
Control conditioned medium endometrium 12 hours TCM-15
|
| Sample_geo_accession | GSM136134
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + control conditionned medium for 12 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136134/suppl/GSM136134.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136135 | GPL570 |
|
Endometrium in trophoblast conditioned medium for 3 hours TCM-6
|
uterus
|
Trophoblast conditioned medium endometrium 3 hours TCM-6
|
Trophoblast conditioned medium endometrium 3 hours TCM-6
|
| Sample_geo_accession | GSM136135
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + Trophoblast conditionned medium for 3hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136135/suppl/GSM136135.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136136 | GPL570 |
|
Endometrium in trophoblast conditioned medium for 3 hours TCM-8
|
uterus
|
Trophoblast conditioned medium endometrium 3 hours TCM-8
|
Trophoblast conditioned medium endometrium 3 hours TCM-8
|
| Sample_geo_accession | GSM136136
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + Trophoblast conditionned medium for 3hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136136/suppl/GSM136136.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136137 | GPL570 |
|
Endometrium in trophoblast conditioned medium for 3 hours TCM-16
|
uterus
|
Trophoblast conditioned medium endometrium 3 hours TCM-16
|
Trophoblast conditioned medium endometrium 3 hours TCM-16
|
| Sample_geo_accession | GSM136137
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + Trophoblast conditionned medium for 3hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136137/suppl/GSM136137.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
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GSM136138 | GPL570 |
|
Endometrium in trophoblast conditioned medium for 12 hours TCM-12
|
uterus
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Trophoblast conditioned medium endometrium 12 hours TCM-12
|
Trophoblast conditioned medium endometrium 12 hours TCM-12
|
| Sample_geo_accession | GSM136138
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + Trophoblast conditionned medium for 12 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136138/suppl/GSM136138.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
| | |
|
GSM136139 | GPL570 |
|
Endometrium in trophoblast conditioned medium for 12 hours TCM-17
|
uterus
|
Trophoblast conditioned medium endometrium 12 hours TCM-17
|
Trophoblast conditioned medium endometrium 12 hours TCM-17
|
| Sample_geo_accession | GSM136139
| | Sample_status | Public on Sep 18 2006
| | Sample_submission_date | Sep 14 2006
| | Sample_last_update_date | Sep 18 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_treatment_protocol_ch1 | E2P4 to decidualization (14 days) + Trophoblast conditionned medium for 12 hrs
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 microg total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 10 microg of cRNA were hybridized for 16 hr at 45C on GeneChip HG 133 Plus 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner HR3000.
| | Sample_data_processing | The data were analyzed with Gene Chip Operating System GCOS version 1.1 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Said,,Talbi
| | Sample_contact_email | talbis@obgyn.ucsf.edu
| | Sample_contact_phone | 415-514-2846
| | Sample_contact_institute | UCSF
| | Sample_contact_address | 500 Parnassus
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94143
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136139/suppl/GSM136139.cel.gz
| | Sample_series_id | GSE5809
| | Sample_data_row_count | 54675
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