Search results for the GEO ID: GSE5856  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM136682 | GPL201 |
|
HUVEC_control_rep1
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Human Umbilical Vein Endothelial Cell, Control, 0 hours
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Human Umbilical Vein Endothelial Cell, Single Donor, Passage_3
|
Data in the VALUE column were computed using the MAS5.0 algorithm.
Data in the VALUE_RMA column were computed using the RMA algorithm.
Data in the VALUE_GCRMA column were computed using the GCRMA algorithm.
|
| Sample_geo_accession | GSM136682
| | Sample_status | Public on Sep 20 2006
| | Sample_submission_date | Sep 18 2006
| | Sample_last_update_date | Sep 19 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Harvested by the Marsden Laboratory
| | Sample_treatment_protocol_ch1 | Confluent monolayer of HUVEC was treated with a vehicle-control for 24 hours.
| | Sample_growth_protocol_ch1 | Isolation and culture as previously described.
| | Sample_growth_protocol_ch1 | Marsden PA et al. Molecular cloning and characterization of human endothelial nitric oxide synthase. FEBS Lett 1992, 307(3):287-293.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated by guanidinium-isothiocyanate extraction followed by cesium chloride density gradient centrifugation.
| | Sample_extract_protocol_ch1 | Chirgwin JM et al. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 1979, 18(24):5294-5299.
| | Sample_extract_protocol_ch1 | Glisin V et al. Ribonucleic acid isolation by cesium chloride centrifugation. Biochemistry 1974, 13(12):2633-2637.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Technical Documentation
| | Sample_hyb_protocol | Affymetrix Technical Documentation
| | Sample_scan_protocol | GeneArray(R) 2500 scanner, Affymetrix Technical Documentation
| | Sample_data_processing | See 'Description' above. Data were processed using MAS5.0, RMA and GCRMA.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Philip,A.,Marsden
| | Sample_contact_email | p.marsden@utoronto.ca
| | Sample_contact_department | Department of Medicine
| | Sample_contact_institute | University of Toronto
| | Sample_contact_address | 1 King's College Circle
| | Sample_contact_city | Toronto
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | M5S 1A8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136682/suppl/GSM136682.CEL.gz
| | Sample_series_id | GSE5856
| | Sample_data_row_count | 8793
| | |
|
GSM136696 | GPL201 |
|
HUVEC_control_rep2
|
Human Umbilical Vein Endothelial Cell, Control, 0 hours
|
Human Umbilical Vein Endothelial Cell, Single Donor, Passage _3
|
Data in the VALUE column were computed using the MAS5.0 algorithm.
Data in the VALUE_RMA column were computed using the RMA algorithm.
Data in the VALUE_GCRMA column were computed using the GCRMA algorithm.
|
| Sample_geo_accession | GSM136696
| | Sample_status | Public on Sep 20 2006
| | Sample_submission_date | Sep 18 2006
| | Sample_last_update_date | Sep 19 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Harvested by the Marsden Laboratory
| | Sample_treatment_protocol_ch1 | Confluent monolayer of HUVEC was treated with a vehicle-control for 24 hours
| | Sample_growth_protocol_ch1 | Isolation and culture as previously described.
| | Sample_growth_protocol_ch1 | Marsden PA et al. Molecular cloning and characterization of human endothelial nitric oxide synthase. FEBS Lett 1992, 307(3):287-293.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated by guanidinium-isothiocyanate extraction followed by cesium chloride density gradient centrifugation.
| | Sample_extract_protocol_ch1 | Chirgwin JM et al. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 1979, 18(24):5294-5299.
| | Sample_extract_protocol_ch1 | Glisin V et al. Ribonucleic acid isolation by cesium chloride centrifugation. Biochemistry 1974, 13(12):2633-2637.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Technical Documentation
| | Sample_hyb_protocol | Affymetrix Technical Documentation
| | Sample_scan_protocol | GeneArray(R) 2500 scanner, Affymetrix Technical Documentation
| | Sample_data_processing | See 'Description' above. Data were processed using MAS5.0, RMA and GCRMA.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Philip,A.,Marsden
| | Sample_contact_email | p.marsden@utoronto.ca
| | Sample_contact_department | Department of Medicine
| | Sample_contact_institute | University of Toronto
| | Sample_contact_address | 1 King's College Circle
| | Sample_contact_city | Toronto
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | M5S 1A8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136696/suppl/GSM136696.CEL.gz
| | Sample_series_id | GSE5856
| | Sample_data_row_count | 8793
| | |
|
GSM136697 | GPL201 |
|
HUVEC_control_rep3
|
Human Umbilical Vein Endothelial Cell, Control, 0 hours
|
Human Umbilical Vein Endothelial Cell, Single Donor, Passage_3
|
Data in the VALUE column were computed using the MAS5.0 algorithm.
Data in the VALUE_RMA column were computed using the RMA algorithm.
Data in the VALUE_GCRMA column were computed using the GCRMA algorithm.
|
| Sample_geo_accession | GSM136697
| | Sample_status | Public on Sep 20 2006
| | Sample_submission_date | Sep 18 2006
| | Sample_last_update_date | Sep 19 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Harvested by the Marsden Laboratory
| | Sample_treatment_protocol_ch1 | Confluent monolayer of HUVEC was treated with a vehicle-control for 24 hours
| | Sample_growth_protocol_ch1 | Isolation and culture as previously described.
| | Sample_growth_protocol_ch1 | Marsden PA et al. Molecular cloning and characterization of human endothelial nitric oxide synthase. FEBS Lett 1992, 307(3):287-293.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated by guanidinium-isothiocyanate extraction followed by cesium chloride density gradient centrifugation.
| | Sample_extract_protocol_ch1 | Chirgwin JM et al. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 1979, 18(24):5294-5299.
| | Sample_extract_protocol_ch1 | Glisin V et al. Ribonucleic acid isolation by cesium chloride centrifugation. Biochemistry 1974, 13(12):2633-2637.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Technical Documentation
| | Sample_hyb_protocol | Affymetrix Technical Documentation
| | Sample_scan_protocol | GeneArray(R) 2500 scanner, Affymetrix Technical Documentation
| | Sample_data_processing | See 'Description' above. Data were processed using MAS5.0, RMA and GCRMA.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Philip,A.,Marsden
| | Sample_contact_email | p.marsden@utoronto.ca
| | Sample_contact_department | Department of Medicine
| | Sample_contact_institute | University of Toronto
| | Sample_contact_address | 1 King's College Circle
| | Sample_contact_city | Toronto
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | M5S 1A8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136697/suppl/GSM136697.CEL.gz
| | Sample_series_id | GSE5856
| | Sample_data_row_count | 8793
| | |
|
GSM136698 | GPL201 |
|
HUVEC_TSA_rep1
|
Human Umbilical Vein Endothelial Cell, TSA (500nM, 24h, Sigma)
|
Human Umbilical Vein Endothelial Cell, Single Donor, Passage_3
|
Data in the VALUE column were computed using the MAS5.0 algorithm.
Data in the VALUE_RMA column were computed using the RMA algorithm.
Data in the VALUE_GCRMA column were computed using the GCRMA algorithm.
|
| Sample_geo_accession | GSM136698
| | Sample_status | Public on Sep 20 2006
| | Sample_submission_date | Sep 18 2006
| | Sample_last_update_date | Sep 19 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Harvested by the Marsden Laboratory
| | Sample_treatment_protocol_ch1 | Confluent monolayer of HUVEC was treated with trichostatin A (TSA, 500 nM, Sigma) for 24 hours
| | Sample_growth_protocol_ch1 | Isolation and culture as previously described.
| | Sample_growth_protocol_ch1 | Marsden PA et al. Molecular cloning and characterization of human endothelial nitric oxide synthase. FEBS Lett 1992, 307(3):287-293.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated by guanidinium-isothiocyanate extraction followed by cesium chloride density gradient centrifugation.
| | Sample_extract_protocol_ch1 | Chirgwin JM et al. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 1979, 18(24):5294-5299.
| | Sample_extract_protocol_ch1 | Glisin V et al. Ribonucleic acid isolation by cesium chloride centrifugation. Biochemistry 1974, 13(12):2633-2637.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Technical Documentation
| | Sample_hyb_protocol | Affymetrix Technical Documentation
| | Sample_scan_protocol | GeneArray(R) 2500 scanner, Affymetrix Technical Documentation
| | Sample_data_processing | See 'Description' above. Data were processed using MAS5.0, RMA and GCRMA.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Philip,A.,Marsden
| | Sample_contact_email | p.marsden@utoronto.ca
| | Sample_contact_department | Department of Medicine
| | Sample_contact_institute | University of Toronto
| | Sample_contact_address | 1 King's College Circle
| | Sample_contact_city | Toronto
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | M5S 1A8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136698/suppl/GSM136698.CEL.gz
| | Sample_series_id | GSE5856
| | Sample_data_row_count | 8793
| | |
|
GSM136700 | GPL201 |
|
HUVEC_TSA_rep2
|
Human Umbilical Vein Endothelial Cell, TSA (500nM, 24h, Sigma)
|
Human Umbilical Vein Endothelial Cell, Single Donor, Passage_3
|
Data in the VALUE column were computed using the MAS5.0 algorithm.
Data in the VALUE_RMA column were computed using the RMA algorithm.
Data in the VALUE_GCRMA column were computed using the GCRMA algorithm.
|
| Sample_geo_accession | GSM136700
| | Sample_status | Public on Sep 20 2006
| | Sample_submission_date | Sep 18 2006
| | Sample_last_update_date | Sep 19 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Harvested by the Marsden Laboratory
| | Sample_treatment_protocol_ch1 | Confluent monolayer of HUVEC was treated with trichostatin A (TSA, 500 nM, Sigma) for 24 hours
| | Sample_growth_protocol_ch1 | Isolation and culture as previously described.
| | Sample_growth_protocol_ch1 | Marsden PA et al. Molecular cloning and characterization of human endothelial nitric oxide synthase. FEBS Lett 1992, 307(3):287-293.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated by guanidinium-isothiocyanate extraction followed by cesium chloride density gradient centrifugation.
| | Sample_extract_protocol_ch1 | Chirgwin JM et al. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 1979, 18(24):5294-5299.
| | Sample_extract_protocol_ch1 | Glisin V et al. Ribonucleic acid isolation by cesium chloride centrifugation. Biochemistry 1974, 13(12):2633-2637.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Technical Documentation
| | Sample_hyb_protocol | Affymetrix Technical Documentation
| | Sample_scan_protocol | GeneArray(R) 2500 scanner, Affymetrix Technical Documentation
| | Sample_data_processing | See 'Description' above. Data were processed using MAS5.0, RMA and GCRMA.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Philip,A.,Marsden
| | Sample_contact_email | p.marsden@utoronto.ca
| | Sample_contact_department | Department of Medicine
| | Sample_contact_institute | University of Toronto
| | Sample_contact_address | 1 King's College Circle
| | Sample_contact_city | Toronto
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | M5S 1A8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136700/suppl/GSM136700.CEL.gz
| | Sample_series_id | GSE5856
| | Sample_data_row_count | 8793
| | |
|
GSM136702 | GPL201 |
|
HUVEC_TSA_rep3
|
Human Umbilical Vein Endothelial Cell, TSA (500nM, 24h, Sigma)
|
Human Umbilical Vein Endothelial Cell, Single Donor, Passage_3
|
Data in the VALUE column were computed using the MAS5.0 algorithm.
Data in the VALUE_RMA column were computed using the RMA algorithm.
Data in the VALUE_GCRMA column were computed using the GCRMA algorithm.
|
| Sample_geo_accession | GSM136702
| | Sample_status | Public on Sep 20 2006
| | Sample_submission_date | Sep 18 2006
| | Sample_last_update_date | Sep 19 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Harvested by the Marsden Laboratory
| | Sample_treatment_protocol_ch1 | Confluent monolayer of HUVEC was treated with trichostatin A (TSA, 500 nM, Sigma) for 24 hours
| | Sample_growth_protocol_ch1 | Isolation and culture as previously described.
| | Sample_growth_protocol_ch1 | Marsden PA et al. Molecular cloning and characterization of human endothelial nitric oxide synthase. FEBS Lett 1992, 307(3):287-293.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total cellular RNA was isolated by guanidinium-isothiocyanate extraction followed by cesium chloride density gradient centrifugation.
| | Sample_extract_protocol_ch1 | Chirgwin JM et al. Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 1979, 18(24):5294-5299.
| | Sample_extract_protocol_ch1 | Glisin V et al. Ribonucleic acid isolation by cesium chloride centrifugation. Biochemistry 1974, 13(12):2633-2637.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Technical Documentation
| | Sample_hyb_protocol | Affymetrix Technical Documentation
| | Sample_scan_protocol | GeneArray(R) 2500 scanner, Affymetrix Technical Documentation
| | Sample_data_processing | See 'Description' above. Data were processed using MAS5.0, RMA and GCRMA.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Philip,A.,Marsden
| | Sample_contact_email | p.marsden@utoronto.ca
| | Sample_contact_department | Department of Medicine
| | Sample_contact_institute | University of Toronto
| | Sample_contact_address | 1 King's College Circle
| | Sample_contact_city | Toronto
| | Sample_contact_state | Ontario
| | Sample_contact_zip/postal_code | M5S 1A8
| | Sample_contact_country | Canada
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM136nnn/GSM136702/suppl/GSM136702.CEL.gz
| | Sample_series_id | GSE5856
| | Sample_data_row_count | 8793
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