Search results for the GEO ID: GSE6104  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM141570 | GPL1355 |
|
Rat right heart, 2 hour Vehicle, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour vehicle sample.
|
| Sample_geo_accession | GSM141570
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141570/suppl/GSM141570.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141571 | GPL1355 |
|
Rat right heart, 2 hour Vehicle, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour vehicle sample.
|
| Sample_geo_accession | GSM141571
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141571/suppl/GSM141571.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141572 | GPL1355 |
|
Rat right heart, 2 hour Vehicle, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour vehicle sample.
|
| Sample_geo_accession | GSM141572
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141572/suppl/GSM141572.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141573 | GPL1355 |
|
Rat right heart, 2 hour Vehicle, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour vehicle sample.
|
| Sample_geo_accession | GSM141573
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141573/suppl/GSM141573.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141574 | GPL1355 |
|
Rat right heart, 2 hour Vehicle, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour vehicle sample.
|
| Sample_geo_accession | GSM141574
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141574/suppl/GSM141574.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141575 | GPL1355 |
|
Rat right heart, 2 hour Low Dose, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141575
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141575/suppl/GSM141575.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141576 | GPL1355 |
|
Rat right heart, 2 hour Low Dose, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141576
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141576/suppl/GSM141576.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141577 | GPL1355 |
|
Rat right heart, 2 hour Low Dose, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141577
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141577/suppl/GSM141577.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141578 | GPL1355 |
|
Rat right heart, 2 hour Low Dose, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141578
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141578/suppl/GSM141578.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141579 | GPL1355 |
|
Rat right heart, 2 hour Low Dose, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141579
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141579/suppl/GSM141579.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141580 | GPL1355 |
|
Rat right heart, 2 hour High Dose, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141580
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141580/suppl/GSM141580.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141581 | GPL1355 |
|
Rat right heart, 2 hour High Dose, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141581
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141581/suppl/GSM141581.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141582 | GPL1355 |
|
Rat right heart, 2 hour High Dose, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141582
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141582/suppl/GSM141582.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141583 | GPL1355 |
|
Rat right heart, 2 hour High Dose, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141583
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141583/suppl/GSM141583.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141584 | GPL1355 |
|
Rat right heart, 2 hour High Dose, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 2 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141584
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141584/suppl/GSM141584.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141585 | GPL1355 |
|
Rat right heart, 6 hour Vehicle, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour vehicle sample.
|
| Sample_geo_accession | GSM141585
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141585/suppl/GSM141585.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141586 | GPL1355 |
|
Rat right heart, 6 hour Vehicle, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour vehicle sample.
|
| Sample_geo_accession | GSM141586
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141586/suppl/GSM141586.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141587 | GPL1355 |
|
Rat right heart, 6 hour Vehicle, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour vehicle sample.
|
| Sample_geo_accession | GSM141587
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141587/suppl/GSM141587.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141588 | GPL1355 |
|
Rat right heart, 6 hour Vehicle, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour vehicle sample.
|
| Sample_geo_accession | GSM141588
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141588/suppl/GSM141588.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141589 | GPL1355 |
|
Rat right heart, 6 hour Vehicle, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour vehicle sample.
|
| Sample_geo_accession | GSM141589
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141589/suppl/GSM141589.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141590 | GPL1355 |
|
Rat right heart, 6 hour Low Dose, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141590
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141590/suppl/GSM141590.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141591 | GPL1355 |
|
Rat right heart, 6 hour Low Dose, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141591
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141591/suppl/GSM141591.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141592 | GPL1355 |
|
Rat right heart, 6 hour Low Dose, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141592
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141592/suppl/GSM141592.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141593 | GPL1355 |
|
Rat right heart, 6 hour Low Dose, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141593
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141593/suppl/GSM141593.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141594 | GPL1355 |
|
Rat right heart, 6 hour Low Dose, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141594
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141594/suppl/GSM141594.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141595 | GPL1355 |
|
Rat right heart, 6 hour High Dose, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141595
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141595/suppl/GSM141595.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141596 | GPL1355 |
|
Rat right heart, 6 hour High Dose, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141596
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141596/suppl/GSM141596.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141597 | GPL1355 |
|
Rat right heart, 6 hour High Dose, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141597
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141597/suppl/GSM141597.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141598 | GPL1355 |
|
Rat right heart, 6 hour High Dose, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141598
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141598/suppl/GSM141598.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141599 | GPL1355 |
|
Rat right heart, 6 hour High Dose, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 6 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141599
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141599/suppl/GSM141599.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141600 | GPL1355 |
|
Rat right heart, 18 hour Vehicle, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour vehicle sample.
|
| Sample_geo_accession | GSM141600
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141600/suppl/GSM141600.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141601 | GPL1355 |
|
Rat right heart, 18 hour Vehicle, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour vehicle sample.
|
| Sample_geo_accession | GSM141601
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141601/suppl/GSM141601.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141602 | GPL1355 |
|
Rat right heart, 18 hour Vehicle, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour vehicle sample.
|
| Sample_geo_accession | GSM141602
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141602/suppl/GSM141602.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141603 | GPL1355 |
|
Rat right heart, 18 hour Vehicle, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour vehicle sample.
|
| Sample_geo_accession | GSM141603
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141603/suppl/GSM141603.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141605 | GPL1355 |
|
Rat right heart, 18 hour Vehicle, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour vehicle sample.
|
| Sample_geo_accession | GSM141605
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141605/suppl/GSM141605.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141606 | GPL1355 |
|
Rat right heart, 18 hour Low Dose, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141606
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141606/suppl/GSM141606.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141607 | GPL1355 |
|
Rat right heart, 18 hour Low Dose, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141607
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141607/suppl/GSM141607.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141608 | GPL1355 |
|
Rat right heart, 18 hour Low Dose, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141608
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141608/suppl/GSM141608.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141609 | GPL1355 |
|
Rat right heart, 18 hour Low Dose, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141609
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141609/suppl/GSM141609.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141610 | GPL1355 |
|
Rat right heart, 18 hour Low Dose, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour Low dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141610
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141610/suppl/GSM141610.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141611 | GPL1355 |
|
Rat right heart, 18 hour High Dose, Rep 1
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141611
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141611/suppl/GSM141611.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141612 | GPL1355 |
|
Rat right heart, 18 hour High Dose, Rep 2
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141612
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141612/suppl/GSM141612.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141613 | GPL1355 |
|
Rat right heart, 18 hour High Dose, Rep 3
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141613
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141613/suppl/GSM141613.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141614 | GPL1355 |
|
Rat right heart, 18 hour High Dose, Rep 4
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141614
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141614/suppl/GSM141614.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
GSM141615 | GPL1355 |
|
Rat right heart, 18 hour High Dose, Rep 5
|
Rat right heart
|
Heart tissue
|
Gene expression data from Rat right ventricle, 18 hour high dose microsphere bead induced PE sample.
|
| Sample_geo_accession | GSM141615
| | Sample_status | Public on Jul 01 2008
| | Sample_submission_date | Oct 23 2006
| | Sample_last_update_date | Feb 20 2008
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | Rat hearts were dissected out, briefly profused, right ventricle was dissected, snapfrozen in Liquid nitrogen. Frozen tissue was powdered in liquid nitrogen and tissue powder used for RNA extraction.
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol RNA extraction followed by Qiagen Clean up.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Sample was labelled by Affymetrix standard protocol
| | Sample_hyb_protocol | Following fragmentation, 15 ug of cRNA were hybridized for 16 hr at 45C on RAT 230-2.0 Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Agilent Gene Array Scanner G2500A
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Nina,,Sanapareddy
| | Sample_contact_email | ninapuppala@yahoo.com
| | Sample_contact_institute | Carolinas Healthcare system
| | Sample_contact_address | 1542 Garden Terrace
| | Sample_contact_city | Charlotte
| | Sample_contact_state | NC
| | Sample_contact_zip/postal_code | 28203
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM141nnn/GSM141615/suppl/GSM141615.CEL.gz
| | Sample_series_id | GSE6104
| | Sample_data_row_count | 31099
| | |
|
| |
| |
Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
Enter the group name here: |
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