Search results for the GEO ID: GSE6364  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM150190 | GPL570 |
|
PE_D_26A
|
uterus - Proliferative endometrium from patient with endometriosis
|
Proliferative Phase Endometriosis
|
Proliferative endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150190
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150190/suppl/GSM150190.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150191 | GPL570 |
|
PE_D_508
|
uterus - Proliferative endometrium from patient with endometriosis
|
Proliferative Phase Endometriosis
|
Proliferative endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150191
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150191/suppl/GSM150191.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150192 | GPL570 |
|
PE_D_587
|
uterus - Proliferative endometrium from patient with endometriosis
|
Proliferative Phase Endometriosis
|
Proliferative endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150192
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150192/suppl/GSM150192.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150193 | GPL570 |
|
PE_D_594
|
uterus - Proliferative endometrium from patient with endometriosis
|
Proliferative Phase Endometriosis
|
Proliferative endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150193
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150193/suppl/GSM150193.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150194 | GPL570 |
|
PE_D_647
|
uterus - Proliferative endometrium from patient with endometriosis
|
Proliferative Phase Endometriosis
|
Proliferative endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150194
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150194/suppl/GSM150194.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150195 | GPL570 |
|
PE_D_651
|
uterus - Proliferative endometrium from patient with endometriosis
|
Proliferative Phase Endometriosis
|
Proliferative endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150195
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150195/suppl/GSM150195.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150196 | GPL570 |
|
PE_N_562
|
uterus - Proliferative endometrium from normal patient
|
Proliferative Phase Normal
|
Proliferative endometrium from normal patient
|
| Sample_geo_accession | GSM150196
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150196/suppl/GSM150196.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150197 | GPL570 |
|
PE_N_598
|
uterus - Proliferative endometrium from normal patient
|
Proliferative Phase Normal
|
Proliferative endometrium from normal patient
|
| Sample_geo_accession | GSM150197
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150197/suppl/GSM150197.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150198 | GPL570 |
|
PE_N_M165
|
uterus - Proliferative endometrium from normal patient
|
Proliferative Phase Normal
|
Proliferative endometrium from normal patient
|
| Sample_geo_accession | GSM150198
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150198/suppl/GSM150198.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150199 | GPL570 |
|
PE_N_M169
|
uterus - Proliferative endometrium from normal patient
|
Proliferative Phase Normal
|
Proliferative endometrium from normal patient
|
| Sample_geo_accession | GSM150199
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150199/suppl/GSM150199.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150201 | GPL570 |
|
PE_N_M182
|
uterus - Proliferative endometrium from normal patient
|
Proliferative Phase Normal
|
Proliferative endometrium from normal patient
|
| Sample_geo_accession | GSM150201
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150201/suppl/GSM150201.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150202 | GPL570 |
|
ESE_D_27A
|
uterus - Early secretory endometrium from patient with endometriosis
|
Early Secretory Phase Endometriosis
|
Early secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150202
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150202/suppl/GSM150202.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150203 | GPL570 |
|
ESE_D_489
|
uterus - Early secretory endometrium from patient with endometriosis
|
Early Secretory Phase Endometriosis
|
Early secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150203
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150203/suppl/GSM150203.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150204 | GPL570 |
|
ESE_D_496
|
uterus - Early secretory endometrium from patient with endometriosis
|
Early Secretory Phase Endometriosis
|
Early secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150204
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150204/suppl/GSM150204.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150205 | GPL570 |
|
ESE_D_517
|
uterus - Early secretory endometrium from patient with endometriosis
|
Early Secretory Phase Endometriosis
|
Early secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150205
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150205/suppl/GSM150205.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150206 | GPL570 |
|
ESE_D_575
|
uterus - Early secretory endometrium from patient with endometriosis
|
Early Secretory Phase Endometriosis
|
Early secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150206
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150206/suppl/GSM150206.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150207 | GPL570 |
|
ESE_D_599
|
uterus - Early secretory endometrium from patient with endometriosis
|
Early Secretory Phase Endometriosis
|
Early secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150207
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150207/suppl/GSM150207.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150208 | GPL570 |
|
ESE_N_629
|
uterus - Early secretory endometrium from normal patient
|
Early Secretory Phase Normal
|
Early secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150208
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150208/suppl/GSM150208.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150209 | GPL570 |
|
ESE_N_650
|
uterus - Early secretory endometrium from normal patient
|
Early Secretory Phase Normal
|
Early secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150209
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150209/suppl/GSM150209.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150210 | GPL570 |
|
ESE_N_664
|
uterus - Early secretory endometrium from normal patient
|
Early Secretory Phase Normal
|
Early secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150210
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150210/suppl/GSM150210.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150211 | GPL570 |
|
MSE_D_33A
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150211
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150211/suppl/GSM150211.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150212 | GPL570 |
|
MSE_D_516
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150212
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150212/suppl/GSM150212.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150213 | GPL570 |
|
MSE_D_540
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150213
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150213/suppl/GSM150213.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150214 | GPL570 |
|
MSE_D_543
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150214
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150214/suppl/GSM150214.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150215 | GPL570 |
|
MSE_D_645
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150215
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150215/suppl/GSM150215.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150216 | GPL570 |
|
MSE_D_678
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150216
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150216/suppl/GSM150216.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150217 | GPL570 |
|
MSE_D_97A
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150217
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150217/suppl/GSM150217.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150218 | GPL570 |
|
MSE_D_G72A
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150218
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150218/suppl/GSM150218.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150219 | GPL570 |
|
MSE_D_G73A
|
uterus - Mid secretory endometrium from patient with endometriosis
|
Mid Secretory Phase Endometriosis
|
Mid secretory endometrium from patient with endometriosis
|
| Sample_geo_accession | GSM150219
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150219/suppl/GSM150219.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150220 | GPL570 |
|
MSE_N_610
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150220
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150220/suppl/GSM150220.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150221 | GPL570 |
|
MSE_N_617
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150221
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150221/suppl/GSM150221.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150222 | GPL570 |
|
MSE_N_626
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150222
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150222/suppl/GSM150222.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150223 | GPL570 |
|
MSE_N_659
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150223
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150223/suppl/GSM150223.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150224 | GPL570 |
|
MSE_N_G98A
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150224
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150224/suppl/GSM150224.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150225 | GPL570 |
|
MSE_N_M153
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150225
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150225/suppl/GSM150225.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150226 | GPL570 |
|
MSE_N_M158
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150226
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150226/suppl/GSM150226.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
GSM150227 | GPL570 |
|
MSE_N_M163
|
uterus - Mid secretory endometrium from normal patient
|
Mid Secretory Phase Normal
|
Mid secretory endometrium from normal patient
|
| Sample_geo_accession | GSM150227
| | Sample_status | Public on May 01 2007
| | Sample_submission_date | Dec 14 2006
| | Sample_last_update_date | Dec 14 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA from whole tissue was performed according the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | biotinylated cRNA was generated from 5.0 ug total RNA using the Affymetrix labeling protocol.
| | Sample_hyb_protocol | cRNA was fragmented and hybridized overnight to Affymetrix U133 Plus 2.0 Genechips.
| | Sample_scan_protocol | Chips were scanned using the HR3000 scanner from Affymetrix.
| | Sample_data_processing | The data were analyzed using the Gene Chip Operating Software Version 1.2 using the Affymetrix default settings and global scaling as the normalization method. The trimmed mean target intensity of each array was arbitrarily set to 500.
| | Sample_platform_id | GPL570
| | Sample_contact_name | Linda,,Giudice
| | Sample_contact_email | giudice@obgyn.ucsf.edu
| | Sample_contact_phone | 415-476-2039
| | Sample_contact_laboratory | Giudice Lab
| | Sample_contact_department | OBGYN and RS
| | Sample_contact_institute | University of California, San Francisco
| | Sample_contact_address | 513 Parnassus Ave. HSE 1619
| | Sample_contact_city | San Francisco
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 94122
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM150nnn/GSM150227/suppl/GSM150227.CEL.gz
| | Sample_series_id | GSE6364
| | Sample_data_row_count | 54675
| | |
|
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| |
Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
Enter the group name here: |
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