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Process data
Search results for the GEO ID: GSE6461
(Click on the check boxes provided under "Select for analysis", to initiate grouping)
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group.
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GSM ID
GPL ID
Select for analysis
Title
Source name
Description
Characteristics
GSM148507
GPL1261
Wild Type Skeletal Muscle Sample (Hind limb)
Normal Mouse Skeletal Muscle
Mature mice skeletal muscle sample from the hind limb
Gene expression data from normal mouse skeletal muscle tissue
GSM148508
GPL1261
Wild Type Skeletal Muscle Sample (Intercostal)
Normal Mouse Skeletal Muscle
Mature mice skeletal intercostal muscle sample
Gene expression data from normal mouse skeletal muscle tissue
GSM148509
GPL1261
Wild Type Skeletal Muscle Sample (forelimb)
Normal Mouse Skeletal Muscle
Mature mice skeletal muscle sample from the forelimb
Gene expression data from normal mouse skeletal muscle tissue
GSM148510
GPL1261
Wild Type Skeletal Muscle Sample (Hind limb 2)
Normal Mouse Skeletal Muscle
Mature mice skeletal muscle sample from the hind limb 2
Gene expression data from normal mouse skeletal muscle tissue
GSM148511
GPL1261
Tumor from MYF-5 CRE/SSM2 mouse CC23
Tumor from MYF-5 CRE/SSM2 mouse
Adolescent mouse tumor sample
Gene expression data from SYT-SSX murine tumor
GSM148512
GPL1261
Tumor from MYF-5 CRE/SSM2 mouse CC17-B
Tumor from MYF-5 CRE/SSM2 mouse
Adolescent mouse tumor sample
Gene expression data from SYT-SSX murine tumor
GSM148513
GPL1261
Tumor from MYF-5 CRE/SSM2 mouse CC17-A
Tumor from MYF-5 CRE/SSM2 mouse
Adolescent mouse tumor sample
Gene expression data from SYT-SSX murine tumor
GSM148514
GPL1261
Tumor from MYF-5 CRE/SSM2 mouse SSM5
Tumor from MYF-5 CRE/SSM2 mouse
Adolescent mouse tumor sample
Gene expression data from SYT-SSX murine tumor
GSM148515
GPL1261
Tumor from MYF-5 CRE/SSM2 mouse SSM4
Tumor from MYF-5 CRE/SSM2 mouse
Adolescent mouse tumor sample
Gene expression data from SYT-SSX murine tumor
Make groups for comparisons
(2 groups will be compared at a time)
Select GSMs and click on "Add groups"
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Select expression type
Transcripts profile based on;
A. Differential status (Up/Down regulation)
Regulation type
Up
Down
Up/Down
Fold change
2
4
6
8
10
p-value
0.05
0.01
0.001
0.0001
0.00001
B. Absolute calls (Transcribed/Not-detected)
Derive calls within/across groups
Within groups
Detection status
Transcribed
Not-detected
Both
Percentage detection
10
20
30
40
50
60
70
80
90
100
Across groups
Detection status
First group:
Transcribed
Not-detected
-
Second group:
Transcribed
Not-detected
Percentage detection
First group:
10
20
30
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100
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Second group:
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