Search results for the GEO ID: GSE6497  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM149417 | GPL1355 |
|
LBN_Ctr-1
|
Native_kidney_from_Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from native kidneys from Lewis Brown Norway rats
|
| Sample_geo_accession | GSM149417
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | No_treatment_applied
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149417/suppl/GSM149417.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149417/suppl/GSM149417.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149418 | GPL1355 |
|
LBN_aTX-1
|
allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
| Sample_geo_accession | GSM149418
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | allogeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149418/suppl/GSM149418.EXP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149418/suppl/GSM149418.cel.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149419 | GPL1355 |
|
LBN_sTX-1
|
syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
Age: 10-12 weeks
|
Gene expression data from syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
| Sample_geo_accession | GSM149419
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | syngeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149419/suppl/GSM149419.EXP.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149419/suppl/GSM149419.cel.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149420 | GPL1355 |
|
LBN_sTX-2
|
syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
Age: 10-12 weeks
|
Gene expression data from syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
| Sample_geo_accession | GSM149420
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | syngeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149420/suppl/GSM149420.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149420/suppl/GSM149420.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149421 | GPL1355 |
|
LBN_sTX-3
|
syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
Age: 10-12 weeks
|
Gene expression data from syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
| Sample_geo_accession | GSM149421
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | syngeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149421/suppl/GSM149421.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149421/suppl/GSM149421.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149422 | GPL1355 |
|
LBN_sTX-4
|
syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
Age: 10-12 weeks
|
Gene expression data from syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
| Sample_geo_accession | GSM149422
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | allogeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149422/suppl/GSM149422.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149422/suppl/GSM149422.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149423 | GPL1355 |
|
LBN_sTX-5
|
syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
Age: 10-12 weeks
|
Gene expression data from syngeneic transplanted kidney from a Lewis rat into a Lewis rat
|
| Sample_geo_accession | GSM149423
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | allogeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149423/suppl/GSM149423.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149423/suppl/GSM149423.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149424 | GPL1355 |
|
LBN_Ctr-2
|
Native_kidney_from_Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from native kidneys from Lewis Brown Norway rats
|
| Sample_geo_accession | GSM149424
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | No_treatment_applied
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149424/suppl/GSM149424.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149424/suppl/GSM149424.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149425 | GPL1355 |
|
LBN_Ctr-3
|
Native_kidney_from_Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from native kidneys from Lewis Brown Norway rats
|
| Sample_geo_accession | GSM149425
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | No_treatment_applied
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149425/suppl/GSM149425.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149425/suppl/GSM149425.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149426 | GPL1355 |
|
LBN_Ctr-4
|
Native_kidney_from_Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from native kidneys from Lewis Brown Norway rats
|
| Sample_geo_accession | GSM149426
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | No_treatment_applied
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149426/suppl/GSM149426.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149426/suppl/GSM149426.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149427 | GPL1355 |
|
LBN_Ctr-5
|
Native_kidney_from_Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from native kidneys from Lewis Brown Norway rats
|
| Sample_geo_accession | GSM149427
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | No_treatment_applied
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149427/suppl/GSM149427.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149427/suppl/GSM149427.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149428 | GPL1355 |
|
LBN_aTX-2
|
allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
| Sample_geo_accession | GSM149428
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | allogeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149428/suppl/GSM149428.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149428/suppl/GSM149428.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149429 | GPL1355 |
|
LBN_aTX-3
|
allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
| Sample_geo_accession | GSM149429
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | allogeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149429/suppl/GSM149429.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149429/suppl/GSM149429.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149430 | GPL1355 |
|
LBN_aTX-4
|
allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
| Sample_geo_accession | GSM149430
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | allogeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149430/suppl/GSM149430.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149430/suppl/GSM149430.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
|
GSM149431 | GPL1355 |
|
LBN_aTX-5
|
allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
Age: 10-12 weeks
|
Gene expression data from allogeneic transplanted kidney from a Lewis rat into a Lewis_Brown_Norway_Rat
|
| Sample_geo_accession | GSM149431
| | Sample_status | Public on Apr 01 2007
| | Sample_submission_date | Dec 11 2006
| | Sample_last_update_date | Dec 11 2006
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_treatment_protocol_ch1 | allogeneic transplanted kidney
| | Sample_growth_protocol_ch1 | na
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | extraction of total RNA was performed using Qiagen Rneasy kit according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 10 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Rat 230 2.0 Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix GMS 418 Array Scanner
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 100.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Bayram,,Edemir
| | Sample_contact_email | edemir@uni-muenster.de
| | Sample_contact_institute | University Hospital Muenster
| | Sample_contact_address | Domagkstr 3a
| | Sample_contact_city | Muenster
| | Sample_contact_zip/postal_code | 48149
| | Sample_contact_country | Germany
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149431/suppl/GSM149431.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM149nnn/GSM149431/suppl/GSM149431.EXP.gz
| | Sample_series_id | GSE6497
| | Sample_data_row_count | 31099
| | |
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