Search results for the GEO ID: GSE6701  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM154575 | GPL1355 |
|
0min ischemia, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154575
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154575/suppl/GSM154575.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154576 | GPL1355 |
|
0min ischemia, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154576
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154576/suppl/GSM154576.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154577 | GPL1355 |
|
0min ischemia, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154577
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154577/suppl/GSM154577.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154578 | GPL1355 |
|
0min ischemia, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154578
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154578/suppl/GSM154578.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154579 | GPL1355 |
|
30min ischemia, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154579
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154579/suppl/GSM154579.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154580 | GPL1355 |
|
30min ischemia, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154580
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154580/suppl/GSM154580.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154581 | GPL1355 |
|
30min ischemia, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154581
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154581/suppl/GSM154581.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154582 | GPL1355 |
|
30min ischemia, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154582
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154582/suppl/GSM154582.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154583 | GPL1355 |
|
60min ischemia, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154583
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154583/suppl/GSM154583.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154584 | GPL1355 |
|
60min ischemia, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154584
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154584/suppl/GSM154584.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154585 | GPL1355 |
|
60min ischemia, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154585
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154585/suppl/GSM154585.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154586 | GPL1355 |
|
60min ischemia, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154586
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154586/suppl/GSM154586.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154587 | GPL1355 |
|
10min ischemia, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154587
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154587/suppl/GSM154587.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154588 | GPL1355 |
|
10min ischemia, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154588
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154588/suppl/GSM154588.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154589 | GPL1355 |
|
10min ischemia, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154589
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154589/suppl/GSM154589.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154590 | GPL1355 |
|
10min ischemia, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154590
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154590/suppl/GSM154590.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154591 | GPL1355 |
|
120min ischemia, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154591
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154591/suppl/GSM154591.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154592 | GPL1355 |
|
120min ischemia, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154592
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154592/suppl/GSM154592.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154593 | GPL1355 |
|
120min ischemia, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154593
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154593/suppl/GSM154593.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154594 | GPL1355 |
|
120min ischemia, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154594
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154594/suppl/GSM154594.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154595 | GPL1355 |
|
0min ischemia+reperfusion, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154595
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154595/suppl/GSM154595.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154596 | GPL1355 |
|
0min ischemia+reperfusion, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154596
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154596/suppl/GSM154596.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154597 | GPL1355 |
|
0min ischemia+reperfusion, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154597
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154597/suppl/GSM154597.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154598 | GPL1355 |
|
0min ischemia+reperfusion, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154598
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154598/suppl/GSM154598.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154599 | GPL1355 |
|
10min ischemia+reperfusion, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154599
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154599/suppl/GSM154599.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154600 | GPL1355 |
|
10min ischemia+reperfusion, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154600
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154600/suppl/GSM154600.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154601 | GPL1355 |
|
10min ischemia+reperfusion, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154601
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154601/suppl/GSM154601.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154602 | GPL1355 |
|
10min ischemia+reperfusion, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 10 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154602
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154602/suppl/GSM154602.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154603 | GPL1355 |
|
30min ischemia+reperfusion, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154603
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154603/suppl/GSM154603.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154604 | GPL1355 |
|
30min ischemia+reperfusion, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154604
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154604/suppl/GSM154604.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154605 | GPL1355 |
|
30min ischemia+reperfusion, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154605
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154605/suppl/GSM154605.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154606 | GPL1355 |
|
30min ischemia+reperfusion, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 30 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154606
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154606/suppl/GSM154606.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154607 | GPL1355 |
|
60min ischemia+reperfusion, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154607
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154607/suppl/GSM154607.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154608 | GPL1355 |
|
60min ischemia+reperfusion, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154608
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154608/suppl/GSM154608.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154609 | GPL1355 |
|
60min ischemia+reperfusion, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154609
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154609/suppl/GSM154609.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154610 | GPL1355 |
|
60min ischemia+reperfusion, 1st prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 60 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154610
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154610/suppl/GSM154610.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154611 | GPL1355 |
|
120min ischemia+reperfusion, 1st prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154611
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154611/suppl/GSM154611.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154612 | GPL1355 |
|
120min ischemia+reperfusion, 2nd prep dup 1
|
Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154612
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154612/suppl/GSM154612.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
| | |
|
GSM154613 | GPL1355 |
|
120min ischemia+reperfusion, 2nd prep dup 2
|
Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia+reperfusion
|
Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
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| Sample_geo_accession | GSM154613
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154613/suppl/GSM154613.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
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GSM154614 | GPL1355 |
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120min ischemia+reperfusion, 1st prep dup 1
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Isolated neonatal rat ventricular myocytes subjected with 120 minutes of ischemia+reperfusion
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Isolated NRVMs 2 days post isolation
|
gene expression data from isolated NRVMs subjected to coverslip hypoxia.
|
| Sample_geo_accession | GSM154614
| | Sample_status | Public on Jan 11 2007
| | Sample_submission_date | Jan 10 2007
| | Sample_last_update_date | Jan 10 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Rattus norvegicus
| | Sample_taxid_ch1 | 10116
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | RNeasy spin column extraction performed according to manufacturer's instructions
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA was prepared using a modified Eberwine protocol
| | Sample_hyb_protocol | 10ug purified biotinylated cRNAs were hybridized to Affymetrix Rat Genome 230 2.0 arrays for 16hrs at 45C. Arrays were washed and stained on an Affymetrix FS450 fluidic station.
| | Sample_scan_protocol | Arrays were scanned using the Affymetrix GeneChip 3000 scanner.
| | Sample_data_processing | CEL files were imported into a Rosetta Resolver database and analyzed with Rosetta Resolver BioSoftware versions 4.0.1.0.7 and 5.0.0.0.
| | Sample_platform_id | GPL1355
| | Sample_contact_name | Kelly,,Pitts
| | Sample_contact_email | kelly.pitts@gilead.com
| | Sample_contact_department | Molecular Pharmacology
| | Sample_contact_institute | Gilead Sciences
| | Sample_contact_address | 7575 west 103rd
| | Sample_contact_city | Westminster
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80021
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM154nnn/GSM154614/suppl/GSM154614.CEL.gz
| | Sample_series_id | GSE6701
| | Sample_data_row_count | 31042
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