Search results for the GEO ID: GSE6880 |
(Click on the check boxes provided under "Select for analysis", to initiate grouping) |
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM158589 | GPL341 |
|
Normal heart #1
|
Rat normal heart, left vent
|
12 week old rat
|
Standard Affy
|
Sample_geo_accession | GSM158589
| Sample_status | Public on Jan 26 2008
| Sample_submission_date | Jan 26 2007
| Sample_last_update_date | Jan 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affy
| Sample_label_ch1 | Standard Affy
| Sample_label_protocol_ch1 | Standard Affy
| Sample_hyb_protocol | Standard Affy
| Sample_scan_protocol | Standard Affy
| Sample_data_processing | Standard Affy
| Sample_platform_id | GPL341
| Sample_contact_name | Erik,--,van Lunteren
| Sample_contact_email | exv4@cwru.edu
| Sample_contact_phone | 216-791-3800
| Sample_contact_department | Pulmonary 111J(W)
| Sample_contact_institute | Cleveland VA Medical Center
| Sample_contact_address | 10701 East Boulevard
| Sample_contact_city | Cleveland
| Sample_contact_state | OH
| Sample_contact_zip/postal_code | 44106
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM158nnn/GSM158589/suppl/GSM158589.CEL.gz
| Sample_series_id | GSE6880
| Sample_data_row_count | 15923
| |
|
GSM158590 | GPL341 |
|
Normal heart #2
|
Rat normal heart, left vent
|
12 week old rat
|
Standard Affy
|
Sample_geo_accession | GSM158590
| Sample_status | Public on Jan 26 2008
| Sample_submission_date | Jan 26 2007
| Sample_last_update_date | Jan 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affy
| Sample_label_ch1 | Standard Affy
| Sample_label_protocol_ch1 | Standard Affy
| Sample_hyb_protocol | Standard Affy
| Sample_scan_protocol | Standard Affy
| Sample_data_processing | Standard Affy
| Sample_platform_id | GPL341
| Sample_contact_name | Erik,--,van Lunteren
| Sample_contact_email | exv4@cwru.edu
| Sample_contact_phone | 216-791-3800
| Sample_contact_department | Pulmonary 111J(W)
| Sample_contact_institute | Cleveland VA Medical Center
| Sample_contact_address | 10701 East Boulevard
| Sample_contact_city | Cleveland
| Sample_contact_state | OH
| Sample_contact_zip/postal_code | 44106
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM158nnn/GSM158590/suppl/GSM158590.CEL.gz
| Sample_series_id | GSE6880
| Sample_data_row_count | 15923
| |
|
GSM158591 | GPL341 |
|
Normal heart #3
|
Rat normal heart, left vent
|
12 week old rat
|
Standard Affy
|
Sample_geo_accession | GSM158591
| Sample_status | Public on Jan 26 2008
| Sample_submission_date | Jan 26 2007
| Sample_last_update_date | Jan 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affy
| Sample_label_ch1 | Standard Affy
| Sample_label_protocol_ch1 | Standard Affy
| Sample_hyb_protocol | Standard Affy
| Sample_scan_protocol | Standard Affy
| Sample_data_processing | Standard Affy
| Sample_platform_id | GPL341
| Sample_contact_name | Erik,--,van Lunteren
| Sample_contact_email | exv4@cwru.edu
| Sample_contact_phone | 216-791-3800
| Sample_contact_department | Pulmonary 111J(W)
| Sample_contact_institute | Cleveland VA Medical Center
| Sample_contact_address | 10701 East Boulevard
| Sample_contact_city | Cleveland
| Sample_contact_state | OH
| Sample_contact_zip/postal_code | 44106
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM158nnn/GSM158591/suppl/GSM158591.CEL.gz
| Sample_series_id | GSE6880
| Sample_data_row_count | 15923
| |
|
GSM158593 | GPL341 |
|
Diabetic heart #1
|
Rat diabetic heart, left vent
|
12 week old rat, at 8 weeks got streptozotocin
|
Standard Affy
|
Sample_geo_accession | GSM158593
| Sample_status | Public on Jan 26 2008
| Sample_submission_date | Jan 26 2007
| Sample_last_update_date | Jan 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affy
| Sample_label_ch1 | Standard Affy
| Sample_label_protocol_ch1 | Standard Affy
| Sample_hyb_protocol | Standard Affy
| Sample_scan_protocol | Standard Affy
| Sample_data_processing | Standard Affy
| Sample_platform_id | GPL341
| Sample_contact_name | Erik,--,van Lunteren
| Sample_contact_email | exv4@cwru.edu
| Sample_contact_phone | 216-791-3800
| Sample_contact_department | Pulmonary 111J(W)
| Sample_contact_institute | Cleveland VA Medical Center
| Sample_contact_address | 10701 East Boulevard
| Sample_contact_city | Cleveland
| Sample_contact_state | OH
| Sample_contact_zip/postal_code | 44106
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM158nnn/GSM158593/suppl/GSM158593.CEL.gz
| Sample_series_id | GSE6880
| Sample_data_row_count | 15923
| |
|
GSM158594 | GPL341 |
|
Diabetic heart #2
|
Rat diabetic heart, left vent
|
12 week old rat, at 8 weeks got streptozotocin
|
Standard Affy
|
Sample_geo_accession | GSM158594
| Sample_status | Public on Jan 26 2008
| Sample_submission_date | Jan 26 2007
| Sample_last_update_date | Jan 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affy
| Sample_label_ch1 | Standard Affy
| Sample_label_protocol_ch1 | Standard Affy
| Sample_hyb_protocol | Standard Affy
| Sample_scan_protocol | Standard Affy
| Sample_data_processing | Standard Affy
| Sample_platform_id | GPL341
| Sample_contact_name | Erik,--,van Lunteren
| Sample_contact_email | exv4@cwru.edu
| Sample_contact_phone | 216-791-3800
| Sample_contact_department | Pulmonary 111J(W)
| Sample_contact_institute | Cleveland VA Medical Center
| Sample_contact_address | 10701 East Boulevard
| Sample_contact_city | Cleveland
| Sample_contact_state | OH
| Sample_contact_zip/postal_code | 44106
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM158nnn/GSM158594/suppl/GSM158594.CEL.gz
| Sample_series_id | GSE6880
| Sample_data_row_count | 15923
| |
|
GSM158595 | GPL341 |
|
Diabetic heart #3
|
Rat diabetic heart, left vent
|
12 week old rat, at 8 weeks got streptozotocin
|
Standard Affy
|
Sample_geo_accession | GSM158595
| Sample_status | Public on Jan 26 2008
| Sample_submission_date | Jan 26 2007
| Sample_last_update_date | Jan 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Standard Affy
| Sample_label_ch1 | Standard Affy
| Sample_label_protocol_ch1 | Standard Affy
| Sample_hyb_protocol | Standard Affy
| Sample_scan_protocol | Standard Affy
| Sample_data_processing | Standard Affy
| Sample_platform_id | GPL341
| Sample_contact_name | Erik,--,van Lunteren
| Sample_contact_email | exv4@cwru.edu
| Sample_contact_phone | 216-791-3800
| Sample_contact_department | Pulmonary 111J(W)
| Sample_contact_institute | Cleveland VA Medical Center
| Sample_contact_address | 10701 East Boulevard
| Sample_contact_city | Cleveland
| Sample_contact_state | OH
| Sample_contact_zip/postal_code | 44106
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM158nnn/GSM158595/suppl/GSM158595.CEL.gz
| Sample_series_id | GSE6880
| Sample_data_row_count | 15923
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Select expression type |
Transcripts profile based on; |
A. Differential status (Up/Down regulation) |
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Regulation type |
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Fold change |
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p-value |
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B. Absolute calls (Transcribed/Not-detected) |
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Derive calls within/across groups |
Within groups |
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Detection status |
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Percentage detection |
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Across groups |
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Detection status |
First group: |
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Second group:
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Percentage detection |
First group: |
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Second group:
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Filter results by number of probes |
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