Search results for the GEO ID: GSE6932  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM159933 | GPL96 |
|
DMSO O hr 1
|
DMSO O hr
|
DMSO O hr
|
DMSO O hr
|
| Sample_geo_accession | GSM159933
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159933/suppl/GSM159933.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159934 | GPL96 |
|
DMSO O hr 2
|
DMSO O hr
|
DMSO O hr
|
DMSO O hr
|
| Sample_geo_accession | GSM159934
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159934/suppl/GSM159934.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159935 | GPL96 |
|
DMSO 12 hr 1
|
DMSO 12 hr
|
DMSO 12 hr
|
DMSO 12 hr
|
| Sample_geo_accession | GSM159935
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159935/suppl/GSM159935.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159936 | GPL96 |
|
DMSO 12 hr 2
|
DMSO 12 hr
|
DMSO 12 hr
|
DMSO 12 hr
|
| Sample_geo_accession | GSM159936
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159936/suppl/GSM159936.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159937 | GPL96 |
|
PP-2 12 hr 1
|
PP-2 12 hr
|
PP-2 12 hr
|
PP-2 12 hr
|
| Sample_geo_accession | GSM159937
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159937/suppl/GSM159937.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159938 | GPL96 |
|
PP-2 12 hr 2
|
PP-2 12 hr
|
PP-2 12 hr
|
PP-2 12 hr
|
| Sample_geo_accession | GSM159938
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159938/suppl/GSM159938.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159939 | GPL96 |
|
DMSO 24 hr 1
|
DMSO 24 hr
|
DMSO 24 hr
|
DMSO 24 hr
|
| Sample_geo_accession | GSM159939
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159939/suppl/GSM159939.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159940 | GPL96 |
|
DMSO 24 hr 2
|
DMSO 24 hr
|
DMSO 24 hr
|
DMSO 24 hr
|
| Sample_geo_accession | GSM159940
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159940/suppl/GSM159940.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159941 | GPL96 |
|
PP-2 24 hr 1
|
PP-2 24 hr
|
PP-2 24 hr
|
PP-2 24 hr
|
| Sample_geo_accession | GSM159941
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159941/suppl/GSM159941.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159942 | GPL96 |
|
PP-2 24 hr 2
|
PP-2 24 hr
|
PP-2 24 hr
|
PP-2 24 hr
|
| Sample_geo_accession | GSM159942
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159942/suppl/GSM159942.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159943 | GPL96 |
|
DMSO 36 hr 1
|
DMSO 36 hr
|
DMSO 36 hr
|
DMSO 36 hr
|
| Sample_geo_accession | GSM159943
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159943/suppl/GSM159943.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159944 | GPL96 |
|
DMSO 36 hr 2
|
DMSO 36 hr
|
DMSO 36 hr
|
DMSO 36 hr
|
| Sample_geo_accession | GSM159944
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159944/suppl/GSM159944.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159945 | GPL96 |
|
PP-2 36 hr 1
|
PP-2 36 hr
|
PP-2 36 hr
|
PP-2 36 hr
|
| Sample_geo_accession | GSM159945
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159945/suppl/GSM159945.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159946 | GPL96 |
|
PP-2 36 hr 2
|
PP-2 36 hr
|
PP-2 36 hr
|
PP-2 36 hr
|
| Sample_geo_accession | GSM159946
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159946/suppl/GSM159946.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159947 | GPL96 |
|
DMSO 48 hr 1
|
DMSO 48 hr
|
DMSO 48 hr
|
DMSO 48 hr
|
| Sample_geo_accession | GSM159947
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159947/suppl/GSM159947.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159948 | GPL96 |
|
DMSO 48 hr 2
|
DMSO 48 hr
|
DMSO 48 hr
|
DMSO 48 hr
|
| Sample_geo_accession | GSM159948
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159948/suppl/GSM159948.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159949 | GPL96 |
|
PP-2 48 hr 1
|
PP-2 48 hr
|
PP-2 48 hr
|
PP-2 48 hr
|
| Sample_geo_accession | GSM159949
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159949/suppl/GSM159949.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
GSM159950 | GPL96 |
|
PP-2 48 hr 2
|
PP-2 48 hr
|
PP-2 48 hr
|
PP-2 48 hr
|
| Sample_geo_accession | GSM159950
| | Sample_status | Public on Feb 07 2007
| | Sample_submission_date | Feb 01 2007
| | Sample_last_update_date | Feb 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Normal human epidermal keratinocytes (NHEKs) were treated with DMSO or 9 (alias PP-2) (0.5 uM) and harvested at 12, 24, 36 and 48 h. Total RNA from each sample was isolated and purified with the RNeasy Mini Kit (Qiagen). Total RNA was examined on an Agilent Bioanalyzer and the 28S/18S ratio exceeded 2.0 for all samples.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | cDNA synthesis and amplification employed the Affymetrix 3' IVT protocol.
| | Sample_hyb_protocol | hybridization followed standard Affymetrix protocols while array washing used a GNF custom machine
| | Sample_scan_protocol | standard Affymetrix procedures using the GeneChip 3000 scanner
| | Sample_data_processing | gcRMA
| | Sample_platform_id | GPL96
| | Sample_contact_name | John,R,Walker
| | Sample_contact_email | jwalker@gnf.org
| | Sample_contact_phone | 858-812-1636
| | Sample_contact_laboratory | Genetics Core
| | Sample_contact_department |
| | Sample_contact_institute | Genomics Institute of the Novartis Research Foundation
| | Sample_contact_address | 10675 John Jay Hopkins
| | Sample_contact_city | San Diego
| | Sample_contact_state | CA
| | Sample_contact_zip/postal_code | 92121
| | Sample_contact_country | USA
| | Sample_contact_web_link | http://biogps.gnf.org
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM159nnn/GSM159950/suppl/GSM159950.CEL.gz
| | Sample_series_id | GSE6932
| | Sample_data_row_count | 22283
| | |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
Enter the group name here: |
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