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Process data
Search results for the GEO ID: GSE7102
(Click on the check boxes provided under "Select for analysis", to initiate grouping)
(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group.
Scroll down
)
GSM ID
GPL ID
Select for analysis
Title
Source name
Description
Characteristics
GSM170817
GPL571
Control 1
Jurkat T-cells transfected with siRNA for GAPDH
Jurkat T-cells 48 hour transfection
See above
GSM170818
GPL571
Control 2
Jurkat T-cells transfected with siRNA for GAPDH
Jurkat T-cells 48 hour transfection
Jurkat T-cells transfected with siRNA for GAPDH for 48 hours
GSM170821
GPL571
Control 3
Jurkat T-cells transfected with siRNA for GAPDH
Jurkat T-cells 48 hour transfection
Jurkat T-cells transfected with siRNA for GAPDH for 48 hours
GSM170822
GPL571
Control 4
Jurkat T-cells non transfected
Jurkat T-cells non-transfected
Jurkat T-cells non-transfected grown for 48 hours
GSM170824
GPL571
Control 5
Jurkat T-cells non transfected
Jurkat T-cells non transfected
Jurkat T-cells non-transfected grown for 48 hours
GSM170825
GPL571
Control 6
Jurkat T-cells non transfected
Jurkat T-cells non transfected
Jurkat T-cells non-transfected grown for 48 hours
GSM170826
GPL571
Treatment 1
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
GSM170827
GPL571
Treatment 2
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
GSM170829
GPL571
Treatment 3
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #2 for Sp3 for 48 hours
GSM170830
GPL571
Treatment 4
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
GSM170831
GPL571
Treatment 5
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
GSM170832
GPL571
Treatment 6
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
Jurkat T-cells transfected with siRNA #6 for Sp3 for 48 hours
Make groups for comparisons
(2 groups will be compared at a time)
Select GSMs and click on "Add groups"
Enter the group name here:
Select expression type
Transcripts profile based on;
A. Differential status (Up/Down regulation)
Regulation type
Up
Down
Up/Down
Fold change
2
4
6
8
10
p-value
0.05
0.01
0.001
0.0001
0.00001
B. Absolute calls (Transcribed/Not-detected)
Derive calls within/across groups
Within groups
Detection status
Transcribed
Not-detected
Both
Percentage detection
10
20
30
40
50
60
70
80
90
100
Across groups
Detection status
First group:
Transcribed
Not-detected
-
Second group:
Transcribed
Not-detected
Percentage detection
First group:
10
20
30
40
50
60
70
80
90
100
-
Second group:
10
20
30
40
50
60
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80
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100
Filter results by number of probes
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