Search results for the GEO ID: GSE7236  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM174501 | GPL201 |
|
GM18516_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174501
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18516
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174501/suppl/GSM174501.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174501/suppl/GSM174501.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174502 | GPL201 |
|
GM18516_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174502
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18516
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174502/suppl/GSM174502.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174502/suppl/GSM174502.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174503 | GPL201 |
|
GM10860_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174503
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10860
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174503/suppl/GSM174503.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174503/suppl/GSM174503.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174504 | GPL201 |
|
GM10860_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174504
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10860
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174504/suppl/GSM174504.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174504/suppl/GSM174504.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174505 | GPL201 |
|
GM10857_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174505
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10857
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174505/suppl/GSM174505.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174505/suppl/GSM174505.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174506 | GPL201 |
|
GM10857_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174506
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10857
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174506/suppl/GSM174506.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174506/suppl/GSM174506.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174507 | GPL201 |
|
GM10856_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174507
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10856
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174507/suppl/GSM174507.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174507/suppl/GSM174507.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174508 | GPL201 |
|
GM10856_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174508
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10856
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174508/suppl/GSM174508.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174508/suppl/GSM174508.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174509 | GPL201 |
|
GM18871_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174509
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18871
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174509/suppl/GSM174509.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174509/suppl/GSM174509.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174510 | GPL201 |
|
GM18871_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174510
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18871
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174510/suppl/GSM174510.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174510/suppl/GSM174510.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174511 | GPL201 |
|
GM10845_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174511
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10845
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174511/suppl/GSM174511.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174511/suppl/GSM174511.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174512 | GPL201 |
|
GM10845_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174512
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10845
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174512/suppl/GSM174512.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174512/suppl/GSM174512.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174513 | GPL201 |
|
GM07349_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174513
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM07349
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174513/suppl/GSM174513.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174513/suppl/GSM174513.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174514 | GPL201 |
|
GM07349_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174514
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM07349
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174514/suppl/GSM174514.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174514/suppl/GSM174514.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174515 | GPL201 |
|
GM18859_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174515
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18859
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174515/suppl/GSM174515.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174515/suppl/GSM174515.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174516 | GPL201 |
|
GM18859_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174516
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18859
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174516/suppl/GSM174516.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174516/suppl/GSM174516.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174517 | GPL201 |
|
GM18501_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174517
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18501
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174517/suppl/GSM174517.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174517/suppl/GSM174517.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174518 | GPL201 |
|
GM18501_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174518
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18501
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174518/suppl/GSM174518.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174518/suppl/GSM174518.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174519 | GPL201 |
|
GM06995_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174519
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM06995
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174519/suppl/GSM174519.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174519/suppl/GSM174519.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174520 | GPL201 |
|
GM06995_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174520
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM06995
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174520/suppl/GSM174520.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174520/suppl/GSM174520.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174521 | GPL201 |
|
GM07029_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174521
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM07029
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174521/suppl/GSM174521.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174521/suppl/GSM174521.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174522 | GPL201 |
|
GM07029_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174522
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM07029
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174522/suppl/GSM174522.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174522/suppl/GSM174522.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174523 | GPL201 |
|
GM18507_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174523
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18507
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174523/suppl/GSM174523.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174523/suppl/GSM174523.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174524 | GPL201 |
|
GM18507_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174524
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18507
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174524/suppl/GSM174524.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174524/suppl/GSM174524.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174525 | GPL201 |
|
GM10851_technical_rep_1
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174525
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10851
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174525/suppl/GSM174525.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174525/suppl/GSM174525.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174526 | GPL201 |
|
GM10851_technical_rep_2
|
B lymphoblastoid cell line
|
CEPH
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174526
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM10851
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174526/suppl/GSM174526.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174526/suppl/GSM174526.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174527 | GPL201 |
|
GM19138_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174527
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM19138
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174527/suppl/GSM174527.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174527/suppl/GSM174527.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174528 | GPL201 |
|
GM19138_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174528
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM19138
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174528/suppl/GSM174528.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174528/suppl/GSM174528.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174529 | GPL201 |
|
GM18504_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174529
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18504
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174529/suppl/GSM174529.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174529/suppl/GSM174529.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174530 | GPL201 |
|
GM18504_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174530
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18504
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174530/suppl/GSM174530.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174530/suppl/GSM174530.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174531 | GPL201 |
|
GM18522_technical_rep_1
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174531
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18522
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174531/suppl/GSM174531.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174531/suppl/GSM174531.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
GSM174532 | GPL201 |
|
GM18522_technical_rep_2
|
B lymphoblastoid cell line
|
YORUBA
|
Gene expression data from B lymphoblastoid cell lines grown according to Coriell instructions.
|
| Sample_geo_accession | GSM174532
| | Sample_status | Public on Mar 14 2007
| | Sample_submission_date | Mar 09 2007
| | Sample_last_update_date | Aug 28 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_biomaterial_provider_ch1 | Coriell Cell Repositories http://ccr.coriell.org/Sections/Search/Search.aspx?PgId=165&q=GM18522
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was performed according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Following fragmentation, 10 microg of cRNA was hybridized for 16 hr at 45C on GeneChip Human Focus Array.
| | Sample_hyb_protocol | Biotinylated cRNA were prepared according to the standard Affymetrix protocol at the UW Center for Expression Arrays.
| | Sample_scan_protocol | Arrays were scanned using the GeneChip Scanner 3000.
| | Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method.
| | Sample_platform_id | GPL201
| | Sample_contact_name | Joshua,M,Akey
| | Sample_contact_email | akeyj@u.washington.edu
| | Sample_contact_laboratory | Akey
| | Sample_contact_department | Genome Sciences
| | Sample_contact_institute | University of Washington
| | Sample_contact_address | 1705 NE Pacific St
| | Sample_contact_city | Seattle
| | Sample_contact_state | WA
| | Sample_contact_zip/postal_code | 98195
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174532/suppl/GSM174532.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM174nnn/GSM174532/suppl/GSM174532.CHP.gz
| | Sample_series_id | GSE7236
| | Sample_data_row_count | 8793
| | |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
|
| Select GSMs and click on "Add groups" |
Enter the group name here: |
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