Search results for the GEO ID: GSE7281 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM175543 | GPL85 |
|
Thoracic aorta age 3mo rep 1
|
Rat thoracic aorta at age 3 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 3 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175543
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175543/suppl/GSM175543.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175543/suppl/GSM175543.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175544 | GPL85 |
|
Thoracic aorta age 3mo rep 2
|
Rat thoracic aorta at age 3 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 3 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175544
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175544/suppl/GSM175544.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175544/suppl/GSM175544.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175545 | GPL85 |
|
Thoracic aorta age 3mo rep 3
|
Rat thoracic aorta at age 3 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 3 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175545
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175545/suppl/GSM175545.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175545/suppl/GSM175545.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175546 | GPL85 |
|
Thoracic aorta age 3mo rep 4
|
Rat thoracic aorta at age 3 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 3 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175546
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175546/suppl/GSM175546.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175546/suppl/GSM175546.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175547 | GPL85 |
|
Thoracic aorta age 6mo rep 1
|
Rat thoracic aorta at age 6 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 6 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175547
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175547/suppl/GSM175547.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175547/suppl/GSM175547.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175548 | GPL85 |
|
Thoracic aorta age 6mo rep 2
|
Rat thoracic aorta at age 6 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 6 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175548
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175548/suppl/GSM175548.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175548/suppl/GSM175548.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175549 | GPL85 |
|
Thoracic aorta age 6mo rep 3
|
Rat thoracic aorta at age 6 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 6 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175549
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175549/suppl/GSM175549.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175549/suppl/GSM175549.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175550 | GPL85 |
|
Thoracic aorta age 6mo rep 4
|
Rat thoracic aorta at age 6 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 6 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175550
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175550/suppl/GSM175550.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175550/suppl/GSM175550.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175551 | GPL85 |
|
Thoracic aorta age 15mo rep 1
|
Rat thoracic aorta at age 15 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 15 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175551
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175551/suppl/GSM175551.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175551/suppl/GSM175551.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175552 | GPL85 |
|
Thoracic aorta age 15mo rep 2
|
Rat thoracic aorta at age 15 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 15 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175552
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175552/suppl/GSM175552.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175552/suppl/GSM175552.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175553 | GPL85 |
|
Thoracic aorta age 15mo rep 3
|
Rat thoracic aorta at age 15 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 15 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175553
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175553/suppl/GSM175553.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175553/suppl/GSM175553.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175554 | GPL85 |
|
Thoracic aorta age 15mo rep 4
|
Rat thoracic aorta at age 15 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 15 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175554
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175554/suppl/GSM175554.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175554/suppl/GSM175554.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175555 | GPL85 |
|
Thoracic aorta age 28mo rep 1
|
Rat thoracic aorta at age 28 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 28 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175555
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175555/suppl/GSM175555.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175555/suppl/GSM175555.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175556 | GPL85 |
|
Thoracic aorta age 28mo rep 2
|
Rat thoracic aorta at age 28 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 28 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175556
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175556/suppl/GSM175556.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175556/suppl/GSM175556.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175557 | GPL85 |
|
Thoracic aorta age 28mo rep 3
|
Rat thoracic aorta at age 28 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 28 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175557
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175557/suppl/GSM175557.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175557/suppl/GSM175557.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
GSM175558 | GPL85 |
|
Thoracic aorta age 28mo rep 4
|
Rat thoracic aorta at age 28 mo
|
Fischer 344/Brown Norway F1 hybrid
Thoracic Aorta from male, age 28 months
|
Gene expression data form thoracic aorta
|
Sample_geo_accession | GSM175558
| Sample_status | Public on Oct 29 2007
| Sample_submission_date | Mar 15 2007
| Sample_last_update_date | Oct 29 2007
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Rattus norvegicus
| Sample_taxid_ch1 | 10116
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | The descending thoracic aorta (1 cm) was isolated and excised from 4 rats of each age in randomized order and the tissue was preserved in RNAlater. Tissue was weighed, disrupted by using a bead homogenizer (FastPrep System®; QBIOgene, Carlsbad, CA) and total RNA was purified by using an RNeasy® Fibrous Tissue Mini Kit (Qiagen, Valencia, CA).
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 5 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 17 hr at 45C on RGU34A Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station.
| Sample_scan_protocol | GeneChips were scanned using the standard Affymetrix protocol.
| Sample_data_processing | The data were analyzed with Microarray Suite version 5.0 (MAS 5.0) using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to 1000.
| Sample_platform_id | GPL85
| Sample_contact_name | Steven,J,Miller
| Sample_contact_email | sjmiller@iupui.edu
| Sample_contact_phone | 317-274-2657
| Sample_contact_fax | 317-274-7334
| Sample_contact_laboratory | Vascular Research
| Sample_contact_department | Surgery
| Sample_contact_institute | Indiana University School of Medicine
| Sample_contact_address | 1001 West 10th Street
| Sample_contact_city | Indianapolis
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 46202-2879
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175558/suppl/GSM175558.CEL.gz
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM175nnn/GSM175558/suppl/GSM175558.EXP.gz
| Sample_series_id | GSE7281
| Sample_data_row_count | 8799
| |
|
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