Search results for the GEO ID: GSE7507  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM181985 | GPL339 |
|
In vitro angiogenesis at 1hr, biological rep 1
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 1hr
|
no additional information
Angiogenesis on Matrigel 1hr
|
| Sample_geo_accession | GSM181985
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181985/suppl/GSM181985.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181986 | GPL339 |
|
In vitro angiogenesis at 1hr, biological rep 2
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 1hr
|
no additional information
Angiogenesis on Matrigel 1hr
|
| Sample_geo_accession | GSM181986
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181986/suppl/GSM181986.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181987 | GPL339 |
|
In vitro angiogenesis at 1hr, biological rep 3
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 1hr
|
no additional information
Angiogenesis on Matrigel 1hr
|
| Sample_geo_accession | GSM181987
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181987/suppl/GSM181987.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181988 | GPL339 |
|
In vitro angiogenesis at 5hr, biological rep 1
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 5hr
|
no additional information
Angiogenesis on Matrigel 5hr
|
| Sample_geo_accession | GSM181988
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181988/suppl/GSM181988.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181989 | GPL339 |
|
In vitro angiogenesis at 5hr, biological rep 2
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 5hr
|
no additional information
Angiogenesis on Matrigel 5hr
|
| Sample_geo_accession | GSM181989
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181989/suppl/GSM181989.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181990 | GPL339 |
|
In vitro angiogenesis at 5hr, biological rep 3
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 5hr
|
no additional information
Angiogenesis on Matrigel 5hr
|
| Sample_geo_accession | GSM181990
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181990/suppl/GSM181990.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181991 | GPL339 |
|
In vitro angiogenesis at 15hr, biological rep 1
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 15hr
|
no additional information
Angiogenesis on Matrigel 15hr
|
| Sample_geo_accession | GSM181991
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181991/suppl/GSM181991.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181992 | GPL339 |
|
In vitro angiogenesis at 15hr, biological rep 2
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 15hr
|
no additional information
Angiogenesis on Matrigel 15hr
|
| Sample_geo_accession | GSM181992
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181992/suppl/GSM181992.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181993 | GPL339 |
|
In vitro angiogenesis at 15hr, biological rep 3
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 15hr
|
no additional information
Angiogenesis on Matrigel 15hr
|
| Sample_geo_accession | GSM181993
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181993/suppl/GSM181993.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181994 | GPL339 |
|
In vitro angiogenesis at 25hr, biological rep 1
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 25hr
|
no additional information
Angiogenesis on Matrigel 25hr
|
| Sample_geo_accession | GSM181994
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181994/suppl/GSM181994.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181995 | GPL339 |
|
In vitro angiogenesis at 25hr, biological rep 2
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 25hr
|
no additional information
Angiogenesis on Matrigel 25hr
|
| Sample_geo_accession | GSM181995
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181995/suppl/GSM181995.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
| | |
|
GSM181996 | GPL339 |
|
In vitro angiogenesis at 25hr, biological rep 3
|
Murine MB114 microvascular Endothelial cells
|
Angiogenesis on Matrigel 25hr
|
no additional information
Angiogenesis on Matrigel 25hr
|
| Sample_geo_accession | GSM181996
| | Sample_status | Public on May 20 2007
| | Sample_submission_date | Apr 12 2007
| | Sample_last_update_date | Apr 12 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_treatment_protocol_ch1 | Matrigel cultures were harvested after 1, 5, 15, 25 hours on Matrigel
| | Sample_growth_protocol_ch1 | MB114 cells were split 1:3 24 hours prior to culture on Matrigel matrix
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Ambion RNAqueus kit, phenol chloroform extraction, Quiagen Rneasy kit
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 6 ug total RNA
| | Sample_hyb_protocol | Following fragmentation, 10 ug of cRNA were hybridized for 16 hr at 45C on GeneChip Drosophila Genome Array. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | Affymetrix GeneChip Scanner 3000
| | Sample_data_processing | MAS 5
| | Sample_platform_id | GPL339
| | Sample_contact_name | Allan,Ray,Albig
| | Sample_contact_email | allan.albig@UCHSC.edu
| | Sample_contact_phone | 303-724-3296
| | Sample_contact_laboratory | Schiemann lab
| | Sample_contact_department | Pharmacology
| | Sample_contact_institute | University of Colorado Health Sciences
| | Sample_contact_address | 12801 E. 17th Ave
| | Sample_contact_city | Aurora
| | Sample_contact_state | CO
| | Sample_contact_zip/postal_code | 80045
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM181nnn/GSM181996/suppl/GSM181996.CEL.gz
| | Sample_series_id | GSE7507
| | Sample_data_row_count | 22690
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Make groups for comparisons |
(2 groups will be compared at a time) |
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| Select GSMs and click on "Add groups" |
Enter the group name here: |
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