Search results for the GEO ID: GSE8027  |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM198192 | GPL339 |
|
Mouse Notch1 null 1
|
mouse Notch1tm1Con/tm1Con 9.5 dpc whole embryo 1
|
Tissue: mouse C57BL/6J-Notch1tm1Con/tm1Con whole 9.5 dpc embryo
|
mouse with homozygous Notch1 alleles
|
| Sample_geo_accession | GSM198192
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198192/suppl/GSM198192.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198193 | GPL339 |
|
Mouse Notch1 null 2
|
Mouse Notch1tm1Con/tm1Con whole 9.5 dpc embryo 2
|
Tissue: Mouse Notch1tm1Con/tm1Con whole 9.5 dpc embryo
|
mouse with homozygous Notch1 alleles
|
| Sample_geo_accession | GSM198193
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198193/suppl/GSM198193.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198194 | GPL339 |
|
Mouse Notch1 het 1
|
Mouse Notch1tm1Con/+ whole 9.5 dpc embryo 1
|
Tissue: Mouse Notch1tm1Con/+ whole 9.5 dpc embryo
|
mouse with heterzygous Notch1 and wildtype alleles
|
| Sample_geo_accession | GSM198194
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198194/suppl/GSM198194.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198195 | GPL339 |
|
Mouse wild type 1
|
Mouse +/+ whole 9.5 embryo 1
|
Tissue: Mouse +/+ whole 9.5 embryo
|
mouse with wildtype alleles at both loci
|
| Sample_geo_accession | GSM198195
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198195/suppl/GSM198195.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198196 | GPL339 |
|
Mouse wild type 2
|
Mouse +/+ 9.5 dpc whole embryo 2
|
Tissue: Mouse +/+ 9.5 dpc whole embryo 2
|
mouse with wildtype alleles at both loci
|
| Sample_geo_accession | GSM198196
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198196/suppl/GSM198196.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198197 | GPL339 |
|
Mouse Dll3 het 1
|
Mouse Dll3neo/+ whole 9.5 dpc embryo 1
|
Tissue: Mouse Dll3neo/+ whole 9.5 dpc embryo
|
mouse with heterzygous D113 and wildtype alleles
|
| Sample_geo_accession | GSM198197
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198197/suppl/GSM198197.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198198 | GPL339 |
|
Mouse Dll3 het 2
|
Mouse Dll3neo/+ whole 9.5 dpc embryo 2
|
Tissue: Mouse Dll3neo/+ whole 9.5 dpc embryo
|
mouse with heterzygous D113 and wildtype alleles
|
| Sample_geo_accession | GSM198198
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198198/suppl/GSM198198.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198199 | GPL339 |
|
Mouse Dll3 null 1
|
Mouse Dll3neo/neo whole 9.5 dpc embryo 1
|
Tissue: Mouse Dll3neo/neo whole 9.5 dpc embryo
|
mouse with homozygous D113 null alleles
|
| Sample_geo_accession | GSM198199
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198199/suppl/GSM198199.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
| | |
|
GSM198200 | GPL339 |
|
Mouse Dll3 null 2
|
Mouse Dll3neo/neo whole 9.5 dpc embryo 2
|
Tissue: Mouse Dll3neo/neo whole 9.5 dpc embryo
|
mouse with homozygous D113 null alleles
|
| Sample_geo_accession | GSM198200
| | Sample_status | Public on Jul 01 2007
| | Sample_submission_date | Jun 05 2007
| | Sample_last_update_date | Jun 07 2007
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_biomaterial_provider_ch1 | Kenro Kusumi, Arizona State University, PO Box 874501, Tempe, AZ 85287
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Total RNA was isolated from whole embryos using the RNAqueous kit (Ambion), according to manufacturer's protocol.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Microarray target was prepared following the Affymetrix protocol. In brief, cDNA was synthesized from total RNA using the SuperScript II double-stranded cDNA synthesis kit (Invitrogen), followed by in vitro transcription, where labeled cRNA was generated (Enzo).
| | Sample_hyb_protocol | Hybridization was carried out according to Affymetrix protocol.
| | Sample_scan_protocol | Scans were carried out according to Affymetrix protocol.
| | Sample_data_processing | RMA normalization implemented in GeneSpring GX 7.3
| | Sample_platform_id | GPL339
| | Sample_contact_name | Kenro,,Kusumi
| | Sample_contact_email | kenro@asu.edu
| | Sample_contact_phone | 480-727-8993
| | Sample_contact_fax | 480-965-6899
| | Sample_contact_department | School of Life Sciences
| | Sample_contact_institute | Arizona State University
| | Sample_contact_address | PO Box 874501
| | Sample_contact_city | Tempe
| | Sample_contact_state | AZ
| | Sample_contact_zip/postal_code | 85287
| | Sample_contact_country | USA
| | Sample_contact_web_link | sols.asu.edu/faculty/kkusumi.php
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM198nnn/GSM198200/suppl/GSM198200.CEL.gz
| | Sample_series_id | GSE8027
| | Sample_data_row_count | 22690
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