Search results for the GEO ID: GSE8140  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM201639 | GPL570 |
|
Fulv treated MCF7 wt xenograft, biological rep1
|
MCF7 xenografts
|
Fulv treatment
|
Gene expression data from MCF-7 xenograft tumors supplemented with estrogen (E2).
|
| Sample_geo_accession | GSM201639
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201639/suppl/GSM201639.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201640 | GPL570 |
|
Fulv treated MCF7 wt xenograft, biological rep2
|
MCF7 xenografts
|
Fulv treatment
|
Gene expression data from MCF-7 xenograft tumors supplemented with estrogen (E2).
|
| Sample_geo_accession | GSM201640
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201640/suppl/GSM201640.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201641 | GPL570 |
|
Fulv treated MCF7 wt xenograft, biological rep3
|
MCF7 xenografts
|
Fulv treatment
|
Gene expression data from MCF-7 xenograft tumors supplemented with estrogen (E2).
|
| Sample_geo_accession | GSM201641
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201641/suppl/GSM201641.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201642 | GPL570 |
|
Fulv treated MCF7 wt xenograft, biological rep4
|
MCF7 xenografts
|
Fulv treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201642
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201642/suppl/GSM201642.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201643 | GPL570 |
|
(E2+G) treated MCF7 wt xenograft, biological rep1
|
MCF7 xenografts
|
(E2+G) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201643
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201643/suppl/GSM201643.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201644 | GPL570 |
|
(E2+G) treated MCF7 wt xenograft, biological rep2
|
MCF7 xenografts
|
(E2+G) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201644
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201644/suppl/GSM201644.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201645 | GPL570 |
|
ED treated MCF7 wt xenograft, biological rep1
|
MCF7 xenografts
|
E2 deprivation (ED) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201645
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201645/suppl/GSM201645.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201646 | GPL570 |
|
ED treated MCF7 wt xenograft, biological rep2
|
MCF7 xenografts
|
E2 deprivation (ED) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201646
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201646/suppl/GSM201646.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201647 | GPL570 |
|
ED treated MCF7 wt xenograft, biological rep3
|
MCF7 xenografts
|
E2 deprivation (ED) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201647
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201647/suppl/GSM201647.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201648 | GPL570 |
|
ED treated MCF7 wt xenograft, biological rep4
|
MCF7 xenografts
|
E2 deprivation (ED) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201648
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201648/suppl/GSM201648.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201649 | GPL570 |
|
(Tam+G) treated MCF-7 wt xenograft, biological rep1
|
MCF7 xenografts
|
(Tam+G) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201649
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201649/suppl/GSM201649.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201650 | GPL570 |
|
(Tam+G) treated MCF-7 wt xenograft, biological rep2
|
MCF7 xenografts
|
(Tam+G) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201650
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201650/suppl/GSM201650.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201651 | GPL570 |
|
(Tam+G) treated MCF-7 wt xenograft, biological rep3
|
MCF7 xenografts
|
(Tam+G) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201651
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201651/suppl/GSM201651.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
|
GSM201652 | GPL570 |
|
(Tam+G) treated MCF-7 wt xenograft, biological rep4
|
MCF7 xenografts
|
(Tam+G) treatment
|
Gene expression data from MCF-7 xenograft tumors that acquired resistance to E2 withdrawal plus tamoxifen.
|
| Sample_geo_accession | GSM201652
| | Sample_status | Public on Dec 01 2008
| | Sample_submission_date | Jun 15 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Trizol extraction of total RNA was carried out using EZ1 RNA universal tissue kit with BioRobot EZ1 workstation according to the manufacturer's instructions.
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol (Expression Analysis Technical Manual, 2001, Affymetrix).
| | Sample_hyb_protocol | Following fragmentation, 5 ug of cRNA were hybridized on Human Genome U133 Plus 2.0 GeneChip following the recommended procedures. GeneChips were washed and stained according to Affymetrix protocol EukGE-ws2v5 450.
| | Sample_scan_protocol | GeneChips were scanned using an Affymetrix GeneChip Scanner (Affymetrix).
| | Sample_data_processing | The data were analyzed with dChip version2006 using Affymetrix default analysis settings and global scaling as normalization method. The trimmed mean target intensity of each array was arbitrarily set to the bottom 10%. of intensity values
| | Sample_platform_id | GPL570
| | Sample_contact_name | Chad,,Creighton
| | Sample_contact_email | creighto@bcm.tmc.edu
| | Sample_contact_department | Biostatistics, Ducan Cancer Center
| | Sample_contact_institute | Baylor College of Medicine
| | Sample_contact_address | One Baylor Plaza, Mail Stop: BCM305
| | Sample_contact_city | Houston
| | Sample_contact_state | TX
| | Sample_contact_zip/postal_code | 77030
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM201nnn/GSM201652/suppl/GSM201652.CEL.gz
| | Sample_series_id | GSE8140
| | Sample_series_id | GSE8141
| | Sample_data_row_count | 54675
| | |
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