Search results for the GEO ID: GSE8425  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM208599 | GPL339 |
|
Hippocampus_WildType_rep1
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Hippocampus from mouse
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Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of wild type mice brains
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of wild type mice brains
|
| Sample_geo_accession | GSM208599
| | Sample_status | Public on Jul 13 2007
| | Sample_submission_date | Jul 09 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The RNAs extracted from microdissected tissue sections were pre-amplified prior to microarray hybridization using the Gene Chip Expression 3′-Amplification Two-Cycle cDNA Synthesis kit (Affymetrix, Santa Clara, CA, USA; #900432), the Gene Chip Sample Cleanup Module (Affymetrix #900371) and the MEGAscript T7 High Yield Transcription Kit (Ambion, Austin, TX, USA; #1334), according to Affymetrix instruction manual #701025 rev. 5.
| | Sample_label_ch1 | Standard Gene Chip microarray hybridization protocol
| | Sample_label_protocol_ch1 | Gene Chip microarray label protocol (Affymetrix Expression Analysis Technical Manual, http://www.affymetrix.com/support/technical/manual/expression_manual.affx).
| | Sample_hyb_protocol | Gene Chip microarray hybridization protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_scan_protocol | Gene Chip microarray scan protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL339
| | Sample_contact_name | Javier,,De Las Rivas
| | Sample_contact_email | jrivas@usal.es
| | Sample_contact_phone | 34 923 294819
| | Sample_contact_fax | 34 923 294743
| | Sample_contact_laboratory | Bioinformatics and Functional Genomics
| | Sample_contact_department | CSIC and University of Salamanca
| | Sample_contact_institute | Cancer Research Center (CiC-IBMCC)
| | Sample_contact_address | Campus Miguel de Unamuno
| | Sample_contact_city | Salamanca
| | Sample_contact_zip/postal_code | 37001
| | Sample_contact_country | Spain
| | Sample_contact_web_link | bioinfow.dep.usal.es
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM208nnn/GSM208599/suppl/GSM208599.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM208nnn/GSM208599/suppl/GSM208599.CHP.gz
| | Sample_series_id | GSE8425
| | Sample_data_row_count | 22690
| | |
|
GSM208716 | GPL339 |
|
Hippocampus_WildType_rep2
|
Hippocampus from mouse
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of wild type mice brains
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of wild type mice brains
|
| Sample_geo_accession | GSM208716
| | Sample_status | Public on Jul 13 2007
| | Sample_submission_date | Jul 09 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The RNAs extracted from microdissected tissue sections were pre-amplified prior to microarray hybridization using the Gene Chip Expression 3′-Amplification Two-Cycle cDNA Synthesis kit (Affymetrix, Santa Clara, CA, USA; #900432), the Gene Chip Sample Cleanup Module (Affymetrix #900371) and the MEGAscript T7 High Yield Transcription Kit (Ambion, Austin, TX, USA; #1334), according to Affymetrix instruction manual #701025 rev. 5.
| | Sample_label_ch1 | Standard Gene Chip microarray hybridization protocol
| | Sample_label_protocol_ch1 | Gene Chip microarray label protocol (Affymetrix Expression Analysis Technical Manual, http://www.affymetrix.com/support/technical/manual/expression_manual.affx).
| | Sample_hyb_protocol | Gene Chip microarray hybridization protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_scan_protocol | Gene Chip microarray scan protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL339
| | Sample_contact_name | Javier,,De Las Rivas
| | Sample_contact_email | jrivas@usal.es
| | Sample_contact_phone | 34 923 294819
| | Sample_contact_fax | 34 923 294743
| | Sample_contact_laboratory | Bioinformatics and Functional Genomics
| | Sample_contact_department | CSIC and University of Salamanca
| | Sample_contact_institute | Cancer Research Center (CiC-IBMCC)
| | Sample_contact_address | Campus Miguel de Unamuno
| | Sample_contact_city | Salamanca
| | Sample_contact_zip/postal_code | 37001
| | Sample_contact_country | Spain
| | Sample_contact_web_link | bioinfow.dep.usal.es
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM208nnn/GSM208716/suppl/GSM208716.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM208nnn/GSM208716/suppl/GSM208716.CHP.gz
| | Sample_series_id | GSE8425
| | Sample_data_row_count | 22690
| | |
|
GSM209491 | GPL339 |
|
Hippocampus_WildType_rep3
|
Hippocampus from mouse
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of wild type mice brains
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of wild type mice brains
|
| Sample_geo_accession | GSM209491
| | Sample_status | Public on Jul 13 2007
| | Sample_submission_date | Jul 10 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The RNAs extracted from microdissected tissue sections were pre-amplified prior to microarray hybridization using the Gene Chip Expression 3′-Amplification Two-Cycle cDNA Synthesis kit (Affymetrix, Santa Clara, CA, USA; #900432), the Gene Chip Sample Cleanup Module (Affymetrix #900371) and the MEGAscript T7 High Yield Transcription Kit (Ambion, Austin, TX, USA; #1334), according to Affymetrix instruction manual #701025 rev. 5.
| | Sample_label_ch1 | Standard Gene Chip microarray hybridization protocol
| | Sample_label_protocol_ch1 | Gene Chip microarray label protocol (Affymetrix Expression Analysis Technical Manual, http://www.affymetrix.com/support/technical/manual/expression_manual.affx).
| | Sample_hyb_protocol | Gene Chip microarray hybridization protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_scan_protocol | Gene Chip microarray scan protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL339
| | Sample_contact_name | Javier,,De Las Rivas
| | Sample_contact_email | jrivas@usal.es
| | Sample_contact_phone | 34 923 294819
| | Sample_contact_fax | 34 923 294743
| | Sample_contact_laboratory | Bioinformatics and Functional Genomics
| | Sample_contact_department | CSIC and University of Salamanca
| | Sample_contact_institute | Cancer Research Center (CiC-IBMCC)
| | Sample_contact_address | Campus Miguel de Unamuno
| | Sample_contact_city | Salamanca
| | Sample_contact_zip/postal_code | 37001
| | Sample_contact_country | Spain
| | Sample_contact_web_link | bioinfow.dep.usal.es
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209491/suppl/GSM209491.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209491/suppl/GSM209491.CHP.gz
| | Sample_series_id | GSE8425
| | Sample_data_row_count | 22690
| | |
|
GSM209506 | GPL339 |
|
Hippocampus_Rasgrf1KO_rep1
|
Hippocampus from mouse Rasgrf1 knockout
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of Rasgrf1 knockout mice brains
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of Rasgrf1 knockout mice brains
|
| Sample_geo_accession | GSM209506
| | Sample_status | Public on Jul 13 2007
| | Sample_submission_date | Jul 10 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The RNAs extracted from microdissected tissue sections were pre-amplified prior to microarray hybridization using the Gene Chip Expression 3′-Amplification Two-Cycle cDNA Synthesis kit (Affymetrix, Santa Clara, CA, USA; #900432), the Gene Chip Sample Cleanup Module (Affymetrix #900371) and the MEGAscript T7 High Yield Transcription Kit (Ambion, Austin, TX, USA; #1334), according to Affymetrix instruction manual #701025 rev. 5.
| | Sample_label_ch1 | Standard Gene Chip microarray hybridization protocol
| | Sample_label_protocol_ch1 | Gene Chip microarray label protocol (Affymetrix Expression Analysis Technical Manual, http://www.affymetrix.com/support/technical/manual/expression_manual.affx).
| | Sample_hyb_protocol | Gene Chip microarray hybridization protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_scan_protocol | Gene Chip microarray scan protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL339
| | Sample_contact_name | Javier,,De Las Rivas
| | Sample_contact_email | jrivas@usal.es
| | Sample_contact_phone | 34 923 294819
| | Sample_contact_fax | 34 923 294743
| | Sample_contact_laboratory | Bioinformatics and Functional Genomics
| | Sample_contact_department | CSIC and University of Salamanca
| | Sample_contact_institute | Cancer Research Center (CiC-IBMCC)
| | Sample_contact_address | Campus Miguel de Unamuno
| | Sample_contact_city | Salamanca
| | Sample_contact_zip/postal_code | 37001
| | Sample_contact_country | Spain
| | Sample_contact_web_link | bioinfow.dep.usal.es
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209506/suppl/GSM209506.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209506/suppl/GSM209506.CHP.gz
| | Sample_series_id | GSE8425
| | Sample_data_row_count | 22690
| | |
|
GSM209507 | GPL339 |
|
Hippocampus_Rasgrf1KO_rep2
|
Hippocampus from mouse Rasgrf1 knockout
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of Rasgrf1 knockout mice brains
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of Rasgrf1 knockout mice brains
|
| Sample_geo_accession | GSM209507
| | Sample_status | Public on Jul 13 2007
| | Sample_submission_date | Jul 10 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The RNAs extracted from microdissected tissue sections were pre-amplified prior to microarray hybridization using the Gene Chip Expression 3′-Amplification Two-Cycle cDNA Synthesis kit (Affymetrix, Santa Clara, CA, USA; #900432), the Gene Chip Sample Cleanup Module (Affymetrix #900371) and the MEGAscript T7 High Yield Transcription Kit (Ambion, Austin, TX, USA; #1334), according to Affymetrix instruction manual #701025 rev. 5.
| | Sample_label_ch1 | Standard Gene Chip microarray hybridization protocol
| | Sample_label_protocol_ch1 | Gene Chip microarray label protocol (Affymetrix Expression Analysis Technical Manual, http://www.affymetrix.com/support/technical/manual/expression_manual.affx).
| | Sample_hyb_protocol | Gene Chip microarray hybridization protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_scan_protocol | Gene Chip microarray scan protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL339
| | Sample_contact_name | Javier,,De Las Rivas
| | Sample_contact_email | jrivas@usal.es
| | Sample_contact_phone | 34 923 294819
| | Sample_contact_fax | 34 923 294743
| | Sample_contact_laboratory | Bioinformatics and Functional Genomics
| | Sample_contact_department | CSIC and University of Salamanca
| | Sample_contact_institute | Cancer Research Center (CiC-IBMCC)
| | Sample_contact_address | Campus Miguel de Unamuno
| | Sample_contact_city | Salamanca
| | Sample_contact_zip/postal_code | 37001
| | Sample_contact_country | Spain
| | Sample_contact_web_link | bioinfow.dep.usal.es
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209507/suppl/GSM209507.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209507/suppl/GSM209507.CHP.gz
| | Sample_series_id | GSE8425
| | Sample_data_row_count | 22690
| | |
|
GSM209508 | GPL339 |
|
Hippocampus_Rasgrf1KO_rep3
|
Hippocampus from mouse Rasgrf1 knockout
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of Rasgrf1 knockout mice brains
|
Laser Capture Microdissection (LCM) to isolate tissue sections of the hippocampus area of Rasgrf1 knockout mice brains
|
| Sample_geo_accession | GSM209508
| | Sample_status | Public on Jul 13 2007
| | Sample_submission_date | Jul 10 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | The RNAs extracted from microdissected tissue sections were pre-amplified prior to microarray hybridization using the Gene Chip Expression 3′-Amplification Two-Cycle cDNA Synthesis kit (Affymetrix, Santa Clara, CA, USA; #900432), the Gene Chip Sample Cleanup Module (Affymetrix #900371) and the MEGAscript T7 High Yield Transcription Kit (Ambion, Austin, TX, USA; #1334), according to Affymetrix instruction manual #701025 rev. 5.
| | Sample_label_ch1 | Standard Gene Chip microarray hybridization protocol
| | Sample_label_protocol_ch1 | Gene Chip microarray label protocol (Affymetrix Expression Analysis Technical Manual, http://www.affymetrix.com/support/technical/manual/expression_manual.affx).
| | Sample_hyb_protocol | Gene Chip microarray hybridization protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_scan_protocol | Gene Chip microarray scan protocol (Affymetrix Expression Analysis Technical Manual).
| | Sample_data_processing | GCOS
| | Sample_platform_id | GPL339
| | Sample_contact_name | Javier,,De Las Rivas
| | Sample_contact_email | jrivas@usal.es
| | Sample_contact_phone | 34 923 294819
| | Sample_contact_fax | 34 923 294743
| | Sample_contact_laboratory | Bioinformatics and Functional Genomics
| | Sample_contact_department | CSIC and University of Salamanca
| | Sample_contact_institute | Cancer Research Center (CiC-IBMCC)
| | Sample_contact_address | Campus Miguel de Unamuno
| | Sample_contact_city | Salamanca
| | Sample_contact_zip/postal_code | 37001
| | Sample_contact_country | Spain
| | Sample_contact_web_link | bioinfow.dep.usal.es
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209508/suppl/GSM209508.CEL.gz
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209508/suppl/GSM209508.CHP.gz
| | Sample_series_id | GSE8425
| | Sample_data_row_count | 22690
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