Search results for the GEO ID: GSE8441 |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM209811 | GPL96 |
|
Muscle_adequate protein_male_rep1
|
vastus lateralis muscle, adequate protein
|
Sex: Male
Protein intake: 1.2 g/kg/day
|
Gene expression data from older male during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209811
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209811/suppl/GSM209811.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209812 | GPL96 |
|
Muscle_inadequate protein_male_rep1
|
vastus lateralis muscle, inadequate protein
|
Sex: Male
Protein intake: 0.5 g/kg/day
|
Gene expression data from older male during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209812
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209812/suppl/GSM209812.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209813 | GPL96 |
|
Muscle_adequate protein_male_rep2
|
vastus lateralis muscle, adequate protein
|
Sex: Male
Protein intake: 1.2 g/kg/day
|
Gene expression data from older male during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209813
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209813/suppl/GSM209813.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209814 | GPL96 |
|
Muscle_inadequate protein_male_rep2
|
vastus lateralis muscle, inadequate protein
|
Sex: Male
Protein intake: 0.5 g/kg/day
|
Gene expression data from older male during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209814
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209814/suppl/GSM209814.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209815 | GPL96 |
|
Muscle_adequate protein_male_rep3
|
vastus lateralis muscle, adequate protein
|
Sex: Male
Protein intake: 1.2 g/kg/day
|
Gene expression data from older male during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209815
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209815/suppl/GSM209815.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209816 | GPL96 |
|
Muscle_inadequate protein_male_rep3
|
vastus lateralis muscle, inadequate protein
|
Sex: Male
Protein intake: 0.5 g/kg/day
|
Gene expression data from older male during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209816
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209816/suppl/GSM209816.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209817 | GPL96 |
|
Muscle_adequate protein_male_rep4
|
vastus lateralis muscle, adequate protein
|
Sex: Male
Protein intake: 1.2 g/kg/day
|
Gene expression data from older male during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209817
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209817/suppl/GSM209817.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209818 | GPL96 |
|
Muscle_inadequate protein_male_rep4
|
vastus lateralis muscle, inadequate protein
|
Sex: Male
Protein intake: 0.5 g/kg/day
|
Gene expression data from older male during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209818
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209818/suppl/GSM209818.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209819 | GPL96 |
|
Muscle_adequate protein_male_rep5
|
vastus lateralis muscle, adequate protein
|
Sex: Male
Protein intake: 1.2 g/kg/day
|
Gene expression data from older male during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209819
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209819/suppl/GSM209819.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209820 | GPL96 |
|
Muscle_inadequate protein_male_rep5
|
vastus lateralis muscle, inadequate protein
|
Sex: Male
Protein intake: 0.5 g/kg/day
|
Gene expression data from older male during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209820
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209820/suppl/GSM209820.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209821 | GPL96 |
|
Muscle_adequate protein_female_rep1
|
vastus lateralis muscle, adequate protein
|
Sex: Female
Protein intake: 1.2 g/kg/day
|
Gene expression data from older female during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209821
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209821/suppl/GSM209821.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209822 | GPL96 |
|
Muscle_inadequate protein_female_rep1
|
vastus lateralis muscle, inadequate protein
|
Sex: Female
Protein intake: 0.5 g/kg/day
|
Gene expression data from older female during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209822
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209822/suppl/GSM209822.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209823 | GPL96 |
|
Muscle_adequate protein_female_rep2
|
vastus lateralis muscle, adequate protein
|
Sex: Female
Protein intake: 1.2 g/kg/day
|
Gene expression data from older female during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209823
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209823/suppl/GSM209823.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209824 | GPL96 |
|
Muscle_inadequate protein_female_rep2
|
vastus lateralis muscle, inadequate protein
|
Sex: Female
Protein intake: 0.5 g/kg/day
|
Gene expression data from older female during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209824
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209824/suppl/GSM209824.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209825 | GPL96 |
|
Muscle_adequate protein_female_rep3
|
vastus lateralis muscle, adequate protein
|
Sex: Female
Protein intake: 1.2 g/kg/day
|
Gene expression data from older female during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209825
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209825/suppl/GSM209825.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209826 | GPL96 |
|
Muscle_inadequate protein_female_rep3
|
vastus lateralis muscle, inadequate protein
|
Sex: Female
Protein intake: 0.5 g/kg/day
|
Gene expression data from older female during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209826
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209826/suppl/GSM209826.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209827 | GPL96 |
|
Muscle_adequate protein_female_rep4
|
vastus lateralis muscle, adequate protein
|
Sex: Female
Protein intake: 1.2 g/kg/day
|
Gene expression data from older female during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209827
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209827/suppl/GSM209827.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209828 | GPL96 |
|
Muscle_inadequate protein_female_rep4
|
vastus lateralis muscle, inadequate protein
|
Sex: Female
Protein intake: 0.5 g/kg/day
|
Gene expression data from older female during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209828
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209828/suppl/GSM209828.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209829 | GPL96 |
|
Muscle_adequate protein_female_rep5
|
vastus lateralis muscle, adequate protein
|
Sex: Female
Protein intake: 1.2 g/kg/day
|
Gene expression data from older female during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209829
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209829/suppl/GSM209829.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209830 | GPL96 |
|
Muscle_inadequate protein_female_rep5
|
vastus lateralis muscle, inadequate protein
|
Sex: Female
Protein intake: 0.5 g/kg/day
|
Gene expression data from older female during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209830
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209830/suppl/GSM209830.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209831 | GPL96 |
|
Muscle_adequate protein_female_rep6
|
vastus lateralis muscle, adequate protein
|
Sex: Female
Protein intake: 1.2 g/kg/day
|
Gene expression data from older female during 1 week of adequate protein intake
|
Sample_geo_accession | GSM209831
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209831/suppl/GSM209831.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
GSM209832 | GPL96 |
|
Muscle_inadequate protein_female_rep6
|
vastus lateralis muscle, inadequate protein
|
Sex: Female
Protein intake: 0.5 g/kg/day
|
Gene expression data from older female during 1 week of inadequate protein intake
|
Sample_geo_accession | GSM209832
| Sample_status | Public on Jul 11 2007
| Sample_submission_date | Jul 11 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_treatment_protocol_ch1 | controlled diets that contained 1.2 g protein•kg-1•d-1 (adequate protein) for one wk followed by 0.5 g protein•kg-1•d-1 (inadequate protein) for a second wk. Fasting state vastus lateralis muscle biopsies were taken on day 7 and day 14 of both dietary trials
| Sample_growth_protocol_ch1 | NA
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA was isolated from the frozen muscle sample using Tri-Reagent following the manufacturer’s instructions. Isolated total RNA was further purified using RNeasy Mini Kits following manufacturer’s protocol
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from a minimum of 5 ug total RNA
| Sample_hyb_protocol | Affymetrix protocol
| Sample_scan_protocol | GeneChips were scanned using the Hewlett-Packard GeneArray Scanner
| Sample_data_processing | The data were summarized with Microarray Suite version 5.0 (MAS 5.0)
| Sample_platform_id | GPL96
| Sample_contact_name | Wayne,,Campbell
| Sample_contact_email | campbellw@purdue.edu
| Sample_contact_phone | 765-494-8236
| Sample_contact_fax | 765-494-0674
| Sample_contact_department | Foods and Nutrition
| Sample_contact_institute | Purdue University
| Sample_contact_address | 700 West State Street
| Sample_contact_city | West Lafayette
| Sample_contact_state | IN
| Sample_contact_zip/postal_code | 47907
| Sample_contact_country | USA
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM209nnn/GSM209832/suppl/GSM209832.CEL.gz
| Sample_series_id | GSE8441
| Sample_data_row_count | 22283
| |
|
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Make groups for comparisons |
(2 groups will be compared at a time) |
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Select GSMs and click on "Add groups" |
Enter the group name here: |
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