Search results for the GEO ID: GSE9144  |
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|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM231132 | GPL339 |
|
Control1
|
Whole skin tissue
|
Rb F19/F19
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231132
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231132/suppl/GSM231132.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
| | |
|
GSM231133 | GPL339 |
|
Control2
|
Whole skin tissue
|
Rb F19/F19
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231133
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations.
| | Sample_label_ch1 | Biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231133/suppl/GSM231133.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
| | |
|
GSM231140 | GPL339 |
|
pRb-/-;p53+/+.1
|
Whole skin tissue
|
Rb F19/F19; K14 cre
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231140
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231140/suppl/GSM231140.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
| | |
|
GSM231153 | GPL339 |
|
pRb-/-;p53+/+.2
|
Whole skin tissue
|
Rb F19/F19; K14 cre
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231153
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231153/suppl/GSM231153.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
| | |
|
GSM231154 | GPL339 |
|
pRb+/+;p53-/-.1
|
Whole skin tissue
|
Trp53 F1/F10; K14 cre
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231154
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231154/suppl/GSM231154.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
| | |
|
GSM231156 | GPL339 |
|
pRb+/+;p53-/-.2
|
Whole skin tissue
|
Trp53 F1/F10; K14 cre
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231156
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231156/suppl/GSM231156.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
| | |
|
GSM231159 | GPL339 |
|
pRb-/-;p53-/-.1
|
Whole skin tissue
|
Rb F19/F19; Trp53 F1/F10; K14 cre
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231159
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231159/suppl/GSM231159.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
| | |
|
GSM231161 | GPL339 |
|
pRb-/-;p53-/-.2
|
Whole skin tissue
|
Rb F19/F19; Trp53 F1/F10; K14 cre
Age: newborn
Strain: FVB
Tissue: skin
|
RNA integrity tested with Bioanalyzer (Agilent)
|
| Sample_geo_accession | GSM231161
| | Sample_status | Public on Nov 14 2007
| | Sample_submission_date | Sep 24 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Mus musculus
| | Sample_taxid_ch1 | 10090
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Mouse skin tissue, obtained after birth, was preserved in RNAlater (Ambion), and disrupted and homogenized using Mixer Mill MM301 (Retsch). Total RNA was extracted and purified from 30 mg of skin using RNeasy Fibrous Tissue Mini kit (Qiagen) following manufacturers' recommendations
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Affymetrix Protocol
| | Sample_hyb_protocol | Affymetrix Protocol
| | Sample_scan_protocol | Affymetrix Protocol
| | Sample_data_processing | RMA transformed, log2 signal values mean centered with mean=0 and stdv=1
| | Sample_platform_id | GPL339
| | Sample_contact_name | Ramón,,García-Escudero
| | Sample_contact_email | ramon.garcia@ciemat.es
| | Sample_contact_institute | CIEMAT
| | Sample_contact_address | Avda Complutense 40, Ed 70A
| | Sample_contact_city | Madrid
| | Sample_contact_zip/postal_code | 28040
| | Sample_contact_country | Spain
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM231nnn/GSM231161/suppl/GSM231161.CEL.gz
| | Sample_series_id | GSE9144
| | Sample_data_row_count | 22690
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