Search results for the GEO ID: GSE9329 |
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GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM237613 | GPL201 |
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Osteoarthritis
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synovial tissue from patient with osteoarthritis
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Cell type: synovial fibroblast-like cell, Tissue: synovial membrane, Disease: osteoarthritis
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Cells from passage 2-5 were used for RNA extraction.
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Sample_geo_accession | GSM237613
| Sample_status | Public on Oct 14 2008
| Sample_submission_date | Oct 15 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | Cells were maintained in RPMI supplemented with 20% FBS. The medium was changed every 3 days.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA extraction was performed by using Isogen (NIPPON GENE) according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Hybridization was carried out for 16 hr at 60 rpm at 45 °C using Affymetrix® Hybridization Oven 640 (Affymetrix, Santa Clara, CA, USA)
| Sample_scan_protocol | The probe array was scanned using Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | Analysis of the microarray data was carried out using GeneChip® Operating Software (GCOS) version 1.1.
| Sample_platform_id | GPL201
| Sample_contact_name | Yoshimi,,Homma
| Sample_contact_email | yoshihom@fmu.ac.jp
| Sample_contact_department | Department of Biomolecular Science
| Sample_contact_institute | Fukushima Medical University
| Sample_contact_address | 1 Hikarigaoka
| Sample_contact_city | Fukushima
| Sample_contact_state | Fukushima
| Sample_contact_zip/postal_code | 9601295
| Sample_contact_country | Japan
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM237nnn/GSM237613/suppl/GSM237613.CEL.gz
| Sample_series_id | GSE9329
| Sample_data_row_count | 8793
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GSM237614 | GPL201 |
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Rhumatoid arthritis
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synovial tissue from patient with rheumatois arthritis
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Cell type: synovial fibroblast-like cell, Tissue: synovial membrane, Disease: rheumatoid arthritis
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Cells from passage 2-5 were used for RNA extraction.
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Sample_geo_accession | GSM237614
| Sample_status | Public on Oct 14 2008
| Sample_submission_date | Oct 15 2007
| Sample_last_update_date | Aug 14 2011
| Sample_type | RNA
| Sample_channel_count | 1
| Sample_organism_ch1 | Homo sapiens
| Sample_taxid_ch1 | 9606
| Sample_growth_protocol_ch1 | Cells were maintained in RPMI supplemented with 20% FBS. The medium was changed every 3 days.
| Sample_molecule_ch1 | total RNA
| Sample_extract_protocol_ch1 | Total RNA extraction was performed by using Isogen (NIPPON GENE) according to the manufacturer's instructions.
| Sample_label_ch1 | biotin
| Sample_label_protocol_ch1 | Biotinylated cRNA were prepared according to the standard Affymetrix protocol from 1 ug total RNA (Expression Analysis Technical Manual, 2001, Affymetrix).
| Sample_hyb_protocol | Hybridization was carried out for 16 hr at 60 rpm at 45 °C using Affymetrix® Hybridization
| Sample_scan_protocol | The probe array was scanned using Affymetrix GeneChip Scanner 3000.
| Sample_data_processing | Analysis of the microarray data was carried out using GeneChip® Operating Software (GCOS) version 1.1.
| Sample_platform_id | GPL201
| Sample_contact_name | Yoshimi,,Homma
| Sample_contact_email | yoshihom@fmu.ac.jp
| Sample_contact_department | Department of Biomolecular Science
| Sample_contact_institute | Fukushima Medical University
| Sample_contact_address | 1 Hikarigaoka
| Sample_contact_city | Fukushima
| Sample_contact_state | Fukushima
| Sample_contact_zip/postal_code | 9601295
| Sample_contact_country | Japan
| Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM237nnn/GSM237614/suppl/GSM237614.CEL.gz
| Sample_series_id | GSE9329
| Sample_data_row_count | 8793
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