Search results for the GEO ID: GSE9715  |
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(Once the selection is made, click on "Add groups" in "Make groups for comparison", to make a group. Scroll down) |
|
GSM ID | GPL ID |
Select for analysis |
Title |
Source name |
Description |
Characteristics |
GSM245372 | GPL96 |
|
fibroblast_N1_Patient12
|
fibroblasts from Patient12
|
Gender:female
Adult
Tissue:Fibroblasts from lower back
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245372
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245372/suppl/GSM245372.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245373 | GPL96 |
|
fibroblast_AF_Patient12
|
fibroblasts from Patient12
|
Gender:female
Adult
Tissue:Fibroblasts from AF on nose
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245373
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245373/suppl/GSM245373.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245374 | GPL96 |
|
fibroblast_N1_Patient2
|
fibroblasts from Patient2
|
Gender:female
Adult
Tissue:Fibroblasts from behind ear
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245374
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245374/suppl/GSM245374.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245375 | GPL96 |
|
fibroblast_AF_Patient2
|
fibroblasts from Patient2
|
Gender:female
Adult
Tissue:Fibroblasts from AF behind left ear
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245375
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245375/suppl/GSM245375.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245376 | GPL96 |
|
fibroblast_PF_Patient2
|
fibroblasts from Patient2
|
Gender:female
Adult
Tissue:Fibroblasts from PF on left 3rd toe
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245376
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245376/suppl/GSM245376.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245377 | GPL96 |
|
fibroblast_N1_Patient4
|
fibroblasts from Patient4
|
Gender:female
Adult
Tissue:Fibroblasts from lower back
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245377
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245377/suppl/GSM245377.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245378 | GPL96 |
|
fibroblast_AF_Patient4
|
fibroblasts from Patient4
|
Gender:female
Adult
Tissue:Fibroblasts from AF on nose
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245378
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245378/suppl/GSM245378.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245379 | GPL96 |
|
fibroblast_PF_Patient4
|
fibroblasts from Patient4
|
Gender:female
Adult
Tissue:Fibroblasts from PF on right 4th toe
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245379
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245379/suppl/GSM245379.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245380 | GPL96 |
|
fibroblast_N1_Patient10
|
fibroblasts from Patient10
|
Gender:female
Adult
Tissue:Fibroblasts from behind ear
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245380
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245380/suppl/GSM245380.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245381 | GPL96 |
|
fibroblast_AF_Patient10
|
fibroblasts from Patient10
|
Gender:female
Adult
Tissue:Fibroblasts from AF on nose
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245381
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245381/suppl/GSM245381.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
|
GSM245382 | GPL96 |
|
fibroblast_PF_Patient10
|
fibroblasts from Patient10
|
Gender:female
Adult
Tissue:Fibroblasts from PF on right 5th toe
|
Gene expression data comparing TSC skin tumor fibroblasts to fibroblasts from same patient normal appearing skin
|
| Sample_geo_accession | GSM245382
| | Sample_status | Public on Mar 01 2008
| | Sample_submission_date | Nov 28 2007
| | Sample_last_update_date | Aug 14 2011
| | Sample_type | RNA
| | Sample_channel_count | 1
| | Sample_organism_ch1 | Homo sapiens
| | Sample_taxid_ch1 | 9606
| | Sample_growth_protocol_ch1 | In vitro with DMEM and 10% Fetal Bovine Serum
| | Sample_molecule_ch1 | total RNA
| | Sample_extract_protocol_ch1 | Qiagen RNEasy mini column
| | Sample_label_ch1 | biotin
| | Sample_label_protocol_ch1 | Samples prepared with Affymetrix single round protocol from 2 ug of total RNA
| | Sample_hyb_protocol | Following fragmentation 12 ug of cRNA were hybridized for 16 hr at 45C. GeneChips were washed and stained in the Affymetrix Fluidics Station 400.
| | Sample_scan_protocol | GeneChips were scanned using the Affymetrix (HP) GeneArray Scanner G2500A.
| | Sample_data_processing | Microarray Suite Normalization 5.1
| | Sample_platform_id | GPL96
| | Sample_contact_name | Eric,,Billings
| | Sample_contact_institute | NHLBI
| | Sample_contact_address | 10 Center Drive
| | Sample_contact_city | Bethesda
| | Sample_contact_state | MD
| | Sample_contact_zip/postal_code | 20874
| | Sample_contact_country | USA
| | Sample_supplementary_file | ftp://ftp.ncbi.nlm.nih.gov/geo/samples/GSM245nnn/GSM245382/suppl/GSM245382.CEL.gz
| | Sample_series_id | GSE9715
| | Sample_data_row_count | 22283
| | |
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