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Gene Protein Transcript Promoter Expression GO/PPI PubMed Cross reference

Expression information for ATG16L1 (Homo sapiens)
(Information derived after consensus based scoring of curated data)

Tissue/Sub tissueCondition/Sub ConditionExpression statusReliability scoreReferences
EndometriumEndometrial cancerTranscribed166
UterusLeiomyomaTranscribed50
CervixCervical cancerTranscribed34
EndometriumNormalTranscribed10
MyometriumNormalTranscribed8
EndometriumEndometriosisTranscribed2
UterusLeiomyosarcomaDormant4
UterusCIN/Cervical dysplasiaDormant4
UterusNormalDormant6
CervixNormalDormant18

NGS based expression information for ATG16L1 (Homo sapiens)
(Information from literature curation)

StudyConditionExpression status
Llorens et al. Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis.
BMC Genomics 2011 Jun 23;12:326.
EGF treated
vs.
untreated control HeLa cells
Up-regulated
Lebedeva et al. Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.
Mol Cell 2011 Aug 5;43(3):340-52.
ELAVL1/HuR knock down
vs.
mock knockdown HeLa cells
Up-regulated
Yang et al. Genomewide characterization of non-polyadenylated RNAs.
Genome Biol. 2011;12(2):R16.
Poly A(-)
vs.
ploy A(+) RNA fraction of HeLa cells
Down-regulated

EST based expression for ATG16L1 (Homo sapiens)
(Information obtained from UniGene database)

UniGene cluster ID Tissue/Condition EST count Transcripts per million
Hs.529322Uterus938
Hs.529322Cervix241
Hs.529322Uterine tumor333
Hs.529322Cervical tumor258