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Gene Protein Transcript Promoter Expression GO/PPI PubMed Cross reference

Expression information for C6orf47 (Homo sapiens)
(Information derived after consensus based scoring of curated data)

Tissue/Sub tissueCondition/Sub ConditionExpression statusReliability scoreReferences
CervixCervical cancerTranscribed146
UterusLeiomyomaTranscribed6
UterusLeiomyosarcomaTranscribed4
UterusCIN/Cervical dysplasiaTranscribed4
EndometriumEndometriosisDormant2
EndometriumNormalDormant10
MyometriumNormalDormant10
CervixNormalDormant18
EndometriumEndometrial cancerDormant46
UterusNormalDormant48

NGS based expression information for C6orf47 (Homo sapiens)
(Information from literature curation)

StudyConditionExpression status
Llorens et al. Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis.
BMC Genomics 2011 Jun 23;12:326.
EGF treated
vs.
untreated control HeLa cells
No change
Lebedeva et al. Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.
Mol Cell 2011 Aug 5;43(3):340-52.
ELAVL1/HuR knock down
vs.
mock knockdown HeLa cells
Not available
Yang et al. Genomewide characterization of non-polyadenylated RNAs.
Genome Biol. 2011;12(2):R16.
Poly A(-)
vs.
ploy A(+) RNA fraction of HeLa cells
Not available

EST based expression for C6orf47 (Homo sapiens)
(Information obtained from UniGene database)

UniGene cluster ID Tissue/Condition EST count Transcripts per million
Hs.247323Uterus14
Hs.247323Cervix120
Hs.247323Uterine tumor111
Hs.247323Cervical tumor129