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Gene Protein Transcript Promoter Expression GO/PPI PubMed Cross reference

Gene information for VSX1 (Homo sapiens) (Information is obtained from NCBI Gene database)

Entrez gene ID 30813 Official gene symbol VSX1 Full name visual system homeobox 1 Aliases ,KTCN,PPCD,PPD,RINX, Gene summary The protein encoded by this gene contains a paired-like homeodomain and binds to the core of the locus control region of the red/green visual pigment gene cluster. The encoded protein may regulate expression of the cone opsin genes early in development. Mutations in this gene can cause posterior polymorphous corneal dystrophy and keratoconus. Alternatively spliced transcript variants encoding different isoforms have been described. [provided by RefSeq] Location Chromosome: 20   Locus: 20p11.23-p11.22 Gene position 25062767 - 25056099  Map Viewer Gene orientation minus Gene size 6669 bp Gene sequence >VSX1:complement(24996099..25002767):Length=6669 TCCAGAGAGGCTCGCGCCTTGCTTGCTAAGGAACCATGACCGGCCGGGACTCGCTTTCCG ACGGGCGCACTAGCAGCAGGGCGCTGGTGCCTGGCGGTTCCCCTAGGGGCTCGCGCCCCC GGGGCTTCGCCATCACGGACCTGCTGGGCTTGGAGGCCGAGCTGCCGGCGCCCGCTGGCC CAGGACAGGGATCTGGCTGCGAGGGTCCGGCAGTCGCGCCGTGCCCGGGCCCGGGGCTTG ACGGCTCCAGCCTGGCGCGTGGGGCCCTACCGCTGGGACTCGGCCTCCTCTGTGGCTTCG GCACGCAGCCGCCGGCGGCCGCTCGAGCACCCTGCCTGCTCCTAGCGGACGTGCCGTTCC TGCCGCCCAGGGGCCCCGAGCCCGCTGCCCCGCTGGCTCCCAGCCGTCCGCCGCCTGCGC TCGGCCGCCAGAAGCGCAGCGACAGCGTCTCCACGTCCGGTAATCAGGCCCGCGCTTTCC GCTCCTGCCCCTGTCCCCTAGGCTCTGAGCCGCGCAGGGGTCACAGACCATCGCCCCACC GCACCCCTGGCCCCAGCGGCCCAGATCTAGGCGGGGAGCCCAGAGCGAGGCCCCGTCGCG GGAGGGGCATTCGCGGAGCTGCGCCGCCTGCCCCTTGCTGCATCCTAAATCCCTGCCTCT CATCCGGGGTCCTGTTCCCTCAGCGATGTGAGACCGCCACCACCTGGTTCCGGGTGGAAC CTTTTGATGAGACCCTGGGGTCTTCAACAACCATCTCCAGAGGGCCATTTTTCCCCCCAG CGCCAGGCGCCAGTCTCCGCCTCTGGCAGCTGCGTGGGTCGGGAAGGCCCGGGCCTGTGG TGGTCACCAGCAGCACCGAACAAGGTACCAGGTGGAAACGCGGGCGGAAATGATCGAATG ATTGACGGGTCCTGGAAGAGTACGGGGCCTCGAGCCCTGGAACTGTCCGCCCCTTGGGGT GCTGAAAAGGGAGTCCCGGGTACCGCGCTCCTCTGCCGGCGCAGCGTCCTCCCAGTCCCC TGTGCAGGAGAAAGAAGCAACCTTGGGGATTCATTGTAGTTACGCCTAGAGATGTGTTCC TGGCCTACCCATTTCCCCAAAGAAATCCAGACGGGTCGCGGGGAAAGAGAAGGAAGCAAT GAAATTCTATAAAGGACAAGGGCTAAGGAAACGAGTGGTTTTGGGTGTGGGAGAGAAAAG AAAGAATTACACAAGAAAGGATGGTATGTGGTAGAATCTAGAGCTGAGCATCCAGGCAGC CAAGGCAAAAAGAGTAGACTGGGTCTTCTGATACTAAAAGGAAGCATGTCAGATCAATAG GCAGGCAGGTTTTTGCTCCACTCTAAAAGGACTTTATTTCATGAGCTCTACGTAAGATAA AATGAAACTCCCTATTAGTGTCACTAAAAATGCAAAACTGTTTTCATGGGATGGGTTCTT TCTTACAAAACCAAAGGCAGCTAAATCCAACTCTGCCAGCATTTCTGAAAGTCTGGAGCA GAGCTGTCCAAGAAAAATGAAATGTGATTTCATGTTTGACGGAAATTTCTCACAGTCACA TTAAAAGTGAAATGAATCTAAATACTATATTTTAACCCAACAATGATAGCAAATATTATC ATTTTACACATAATCAATACAAAAATATTTTACTTTTTAGGAGCACTAAGTCTTCTAACT CCATTAAGTGATTTATGTTTACAGCATGTCTTGATCTTACTGGCCACATTTCATGTGCTT AATAACCTTATGTGTCTCATGTCTCATCAGGTTGGACAGCCCAATACAGAATGTTTTAAT CCAAGCCAGGTTTCTGGTGAACTAATTGATGGATGAGTAAAACTAGTATTATTTAGTTAT TTTTGCCTTTATTCATTTTAAAGATATTTTGAGGCAATTATGCCTTCTAGCAATGAATCT CACAATAGTTTGGCCTTCTAACCTTCTTTTCCATCTAGACTTTTTGATGTATTGGATATA AAAAGGTAAAGCACAGTGGAGTGGTTCTCAAATTTTCAAGGGCAACTACACATCATCTGA GCACACTTGTCAAGAATGAGCCTCCTAGATCCCACCTCCAGAGATTCTGATTTGGTGCAT CAGGGAAGGGTTGCAGTTCTGACGAGGGTTCTGATGTCACAAGCCCCAGACTTCCTTTGG GAAATGTTGGTGTAGAGGTTAAGATGATGAGGCTGGGGGCATAGGGGTGGATGTGTTTGG AAGCAGTGTGGGGATAGAAAGTGCAATCAGTGGCTGAGTAGTTTTGGCTTCAGATAATCT GGGATTTGAATTCTCAACTTCACCATTTACTACCTGTGTGATTTTGGGCAAATTACTTAA CCATTCGGTGCCTCAGTTTCCTCATCTGTAAAAATAGGATGATAATAATAGCAGCAGCCA TTTTGGTGTTTTATTATTATATTAAGAATACTTGAGATAATGTATGGACAGTGTTAAGCA CAGAGCCTGGGATCTAGTAGGCACTAAAAATGCTGGCTCATACTGTAAACTACTTAAGTA CCCAAGAGGTTCATAACTTCAATCCTCACATTAAAATCCAGGAAATAGAGGGGATATGAT CACCCTTAAAGTCCTCTTCTTCTTTCTGTGCCATCAGATGAGGACAGCCAGTCTGAAGAC AGGAATGACCTAAAGGCATCCCCCACCTTGGGCAAGAGGAAGAAGCGGCGGCACAGGTAT AGGGCCAGGCAGTCCCCTCTGCCTGCCTTTCCTCGGGACACAGCCCAAGGTTTATGGCAC CTGCATCTGAGAATTTATGGCCCGGCATGATAGCAGGCCCAGTGGTTTCCTGGTTGGCAA TGGGAAGGGCACAGAAGCCATTTGGGAAGATAATTCTGCAGTTCCTAGGAGGCTGGGAAA ATGCTACAATCTTGCTAGCATTTTTTTGGGAGCATTTTAAAGACAATTTTGTGGATCTGT CAAATGGATTTTGTCAGAATGAGCTGATGGAATTCATTAAGAAAGAGCTAAAGAACTGTT TTCGTTTGAATCAAATTTCTGGACATCAGCTAATCATTCAGAGGTGGGGTGTTCCATTAT CATGAAGTGGCTTCTAGGGTCTGGACAGCAGAGGAAGCAGGCACGGTGGTCCTTAAGGCC AGGGAGGCTGCTGTCCCCAGGGGACATGTGCCCACCTGTGTGTTTTGGGGTCCTTGCAGG ACAGTTTTCACTGCTCACCAGCTGGAAGAGTTGGAGAAGGCATTCAGCGAGGCCCACTAC CCTGATGTGTATGCCCGAGAAATGCTGGCTGTGAAAACTGAGCTCCCCGAAGACCGGATA CAGGTGTCTGGGGTCCCTTTTCTCCGCTCCAAAGATACCACAGAGAACGTGTCATTCCCA CATTCAGTGAGCCAATCAGCAGTCCCTTCTCTATAGCCAACACGCTCCCTTTGCATAGAA ACTGAGGGTCCCTTAGCTGAAGGCACCACAAGAGCTTGCCCCTATGACCCTCATGCCTTT TTTCATTTTATTATTATTTAGTATCAAATCATTCTTTAAAATCACATGATAATGTGTGCT GCAACTAGAAACTATAAAGATATGTCAATGAAAAAAAAAAAAAAGAGACTACCTCTCCAT CTCAAACCCTGAAAGAAATCAACACAAATGCCTGAGGAGACCTTTCTCTACTTTGTGGAG TATATTATCTGCCCCTGAATATGTATGTGCATATACATATCTACATGCATATATACACAC ACTCACATGCATACATAGAATTTTCCTCTTGGTTTTATCAGAAGATATGTCACTAACTCT TTTTTTAACAGCTAAACCGTATTTCATAATAGTCCTTTATTAACATAATGTTTTTAATGA GAAATATCACCAGCAACCCAATAGCCTAAGCTCGGAAGGAGCCAGTGCCCCAGTGAGCTC ATTCCAATTAATGAGAAAAAGCAGGAAACACTGTAGTTGACCTCTTCACACAATGTGGGA AAAGGGAGTTTGATTCTTTAGTTTTTTTCATTCCTGACTCTATGGAAACTTCAGTGGACG TGGTCACAAGTGTCCCTACTGCGTTGAATGCCCGTGAGTCCGGACCGCACGTGGGCGCTG CTGGGGGCTCCTGGGCGCTCTCCCTGAGGGCGGCTGGTTGGCCCTCGGGAGCTATTTCCT TCAGAAATAGCATGGGATCATGCTCGGGAGAGAAGATCCGAGCCCTGGGACGCCGCCTCC GCTCCTCCAGGCGCCCCTCTTCACTGTCTCTTCTGTGTGCCTTCTGCTTCTCCTGCCTCC AACCAGGTCTGGTTTCAAAACCGCAGGGCCAAATGGCGCAAGCGGGAGAAGCGCTGGGGC GGCAGCAGCGTGATGGCCGAGTACGGGCTGTACGGGGCCATGGTGCGCCACTGCATCCCG CTGCCAGACTCCGTGCTCAACTCCGCCGAGGGCGGCCTGCTGGGCTCCTGCGCGCCCTGG CTCCTGGGTAAGGAAGGGCCCCCGGGATCGCACGGCTCGAGGTGTTGTAGGAGGTGGGGG AATCCCAGGGTGTCCCCACCGAGGCAGCCATTTCCAAAGCAAAGCAACGTCAGTTTACTG AGATTCAGGTCCAGAACCGTTCTTATTATTTTTAATTAATAACAAAGCTTGCAGCAACTG GATGGTTGCCTCATTTTTCACAGAGACTGTCTAGGCTGTGTGGAAGTCTCACCGGGCTAT GCATGCTAAATATGTATTTGGGATTTAAGGGTGAAATGACATCATTGCATTAACAGCATC CAAGTGTTGAATGCTGTTAGAATTTTTAGAAACCATACAATTTAGGGCACTTGGTAATAG GAAACAGGGCAGTGCTGAGCAGCGACCCCTGGGGACAGTGAGCCCCTCCATCTGAGTCAG GAGGGCTGGCCCCGGGCTTGGTTCTGCCATGAACAACCTGCCGAGTGGCTTTTCTGTCCC TTAGATTTTTGGTGCTCAAAGAGTCTCCGCTGCTGAGACCCAGCACTCTCAGGATGCTCC ACCCTTGTTGCCCTGTTTGCTGTCGCCAGAAACCAACAGGCAGGGATCACAGATTGTGGG AATGAGTCACAGATGAGTACCTCCGGGCACGGGGTAATTAGTTAGGAGGATCATGGTGGC ATTTTAGGTTTAGATGGAGGAAGTTTTTTGCTCAGCGAACAGTTTTTGAACAGCTACCAA GCAGCCCTATCCTGGGCACTGGAGGTTCCAATCATAGATATGTCCTGACTTTGCTCTCAA GGACTGAAACACTAGAGGGAGCATTGTAGGCAGTGACCCAAACTGGCTCATCTGAAATTG CACAAACAGGTGGGGGAGGGCACTTACTGGCATCTGCGAGACCGCAGCCTAGGGGAAAGT GGGCCCAATGCCAATCACTGTGTCATCCTAAACACCTTTGCTGGATGTGACCCGGGGTCA GACACCTGCTTTAAACCCCTAAGGTGGGAGTTACCTACCTGCCTCTCCTGTAGGCCCCAG AGATAGGCACTGACAAGGACAATTCTAGTGGGATTTAGAGAACAATAAGAAGGAAATTTA CTTCATTGCTGAATTTAAATTTTTATTTTTATTTTTTCCTTTTTATTTTTTTTTTTACAA GGGATGCATAAAAAATCCATGGGGATGATAAGGAAGCCAGGAAGTGAAGATAAGTTGGCA GGACTCTGGGGCTCTGACCACTTCAAAGAAGGTTCTAGCCAGAGTGAGTCAGGATCACAG AGAGGCTCAGATAAAGTGAGCCCTGAGAATGGCTTGGAAGATGTGGCTATTGACCTCTCC AGCTCTGCCCGGCAGGAGACCAAGAAAGTGCACCCTGGGGCTGGTGCTCAAGGAGGCTCC AACTCCACGGCACTGGAGGGGCCCCAGCCAGGGAAGGTGGGAGCCACATGAGACCCACAG GTCCCACTGTCAAAGGCTGAAAATGTGCATATTCCTCACTGGCATTTTCCAAAAGACAAA AATTGTCCAAGACATATACTCTCAGTTTGATTTTCTTCTGACAATGTCAAGATAAAATGC AATGCCACTTGCTTTAAGAGGACAGATGAGTGACCTAGGGAAAATTCTATTTCATTCTAG AATGGAAACGGTTCCTTAATGGCACTTTAACCAGTTAACTTGGTGCAAAACTTTTGATTC TCTTTTGTAGCTTGAGCAGGGAGGATCCGAAGTTCAAAAATGATTTCACTGCTGGGCATC ATTTGAGATGTGTGGTTCAATGTACTGTATAGATGAATAGGTTAGGTCTGATGTCCTCAT TCTCAATTAGGAAATATAAAATTGTTTAATATCCAGAAGAATCTGATATCATCATAGTGA AGACTCCATACAGACACATGAATGAATTATATTGTCTTTACCTTGAACTTGGCCTTGGAT ATTTCAATTTTCTTGTTAGGGAGTAATTTTGTGTTTTCTTGAGTGTCACTTGATAGGCTA TGCATATTGGAATTCAAAGAAACCCATACTCTAGTCGTTTCTGCATTTCCTTTAAAAATA GCATGGGATCATATTTAAACAATTGTTGGATAGCTGGAAACAGTGTTTTTAGGTCAGACC AGGCTTTTGGTCTTTCAAAATTTGTGATTGAAAGCACTTTAGTGACTTGGATTTTGTAAA TCTTTCCTTTCCTGCGTTTCCTTTGCCATTTATTTATTCTTTAAAAATAAACATTTTGTG GTGTGTTTA OMIM ID 605020