Database of mammalian genes
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Gene
Protein
Transcript
Promoter
Expression
GO/PPI
PubMed
Cross reference
Gene Ontology information for SOX9 (
Homo sapiens
)
(Information is obtained from AmiGO)
ID
Term
Evidence
biological_process
GO:0001501
skeletal system development
IMP
GO:0001502
cartilage condensation
ISS
GO:0001708
cell fate specification
ISS
GO:0001837
epithelial to mesenchymal transition
ISS
GO:0001894
tissue homeostasis
ISS
GO:0001934
positive regulation of protein phosphorylation
ISS
GO:0001942
hair follicle development
ISS
GO:0002053
positive regulation of mesenchymal cell proliferation
ISS
GO:0002683
negative regulation of immune system process
ISS
GO:0003170
heart valve development
ISS
GO:0003179
heart valve morphogenesis
ISS
GO:0003188
heart valve formation
IEA
GO:0003203
endocardial cushion morphogenesis
ISS
GO:0003413
chondrocyte differentiation involved in endochondral bone morphogenesis
IMP
GO:0003415
chondrocyte hypertrophy
ISS
GO:0006334
nucleosome assembly
IDA
GO:0006338
chromatin remodeling
IDA
GO:0006351
transcription, DNA-dependent
IDA
GO:0006351
transcription, DNA-dependent
IMP
GO:0006461
protein complex assembly
IDA
GO:0006468
protein phosphorylation
ISS
GO:0007165
signal transduction
ISS
GO:0007173
epidermal growth factor receptor signaling pathway
ISS
GO:0007283
spermatogenesis
ISS
GO:0008284
positive regulation of cell proliferation
IMP
GO:0008584
male gonad development
IEP
GO:0008584
male gonad development
IMP
GO:0010564
regulation of cell cycle process
IMP
GO:0010634
positive regulation of epithelial cell migration
IMP
GO:0014032
neural crest cell development
IEA
GO:0014068
positive regulation of phosphatidylinositol 3-kinase cascade
ISS
GO:0019100
male germ-line sex determination
ISS
GO:0019933
cAMP-mediated signaling
IDA
GO:0030155
regulation of cell adhesion
IEA
GO:0030198
extracellular matrix organization
IEA
GO:0030279
negative regulation of ossification
ISS
GO:0030502
negative regulation of bone mineralization
IEA
GO:0030850
prostate gland development
IEP
GO:0030858
positive regulation of epithelial cell differentiation
ISS
GO:0030916
otic vesicle formation
ISS
GO:0031018
endocrine pancreas development
IEA
GO:0032331
negative regulation of chondrocyte differentiation
ISS
GO:0032332
positive regulation of chondrocyte differentiation
IDA
GO:0032332
positive regulation of chondrocyte differentiation
IMP
GO:0035019
somatic stem cell maintenance
ISS
GO:0035622
intrahepatic bile duct development
IEA
GO:0042127
regulation of cell proliferation
ISS
GO:0042981
regulation of apoptosis
ISS
GO:0043066
negative regulation of apoptosis
IMP
GO:0043066
negative regulation of apoptosis
ISS
GO:0045595
regulation of cell differentiation
IEA
GO:0045662
negative regulation of myoblast differentiation
ISS
GO:0045732
positive regulation of protein catabolic process
IEA
GO:0045892
negative regulation of transcription, DNA-dependent
IMP
GO:0045893
positive regulation of transcription, DNA-dependent
IDA
GO:0045893
positive regulation of transcription, DNA-dependent
IMP
GO:0045944
positive regulation of transcription from RNA polymerase II promoter
IDA
GO:0046533
negative regulation of photoreceptor cell differentiation
ISS
GO:0048709
oligodendrocyte differentiation
IEA
GO:0050679
positive regulation of epithelial cell proliferation
IEP
GO:0050679
positive regulation of epithelial cell proliferation
ISS
GO:0050680
negative regulation of epithelial cell proliferation
ISS
GO:0051216
cartilage development
ISS
GO:0060008
Sertoli cell differentiation
ISS
GO:0060009
Sertoli cell development
IEA
GO:0060018
astrocyte fate commitment
IEA
GO:0060041
retina development in camera-type eye
ISS
GO:0060221
retinal rod cell differentiation
ISS
GO:0060350
endochondral bone morphogenesis
IEA
GO:0060512
prostate gland morphogenesis
IEA
GO:0060517
epithelial cell proliferation involved in prostatic bud elongation
ISS
GO:0060729
intestinal epithelial structure maintenance
ISS
GO:0060784
regulation of cell proliferation involved in tissue homeostasis
ISS
GO:0061036
positive regulation of cartilage development
IDA
GO:0061138
morphogenesis of a branching epithelium
ISS
GO:0070168
negative regulation of biomineral tissue development
ISS
GO:0070371
ERK1 and ERK2 cascade
ISS
GO:0071260
cellular response to mechanical stimulus
ISS
GO:0071300
cellular response to retinoic acid
IEP
GO:0071347
cellular response to interleukin-1
IEP
GO:0071364
cellular response to epidermal growth factor stimulus
ISS
GO:0071504
cellular response to heparin
ISS
GO:0071560
cellular response to transforming growth factor beta stimulus
IDA
GO:0072034
renal vesicle induction
ISS
GO:0072197
ureter morphogenesis
IEA
GO:0072289
metanephric nephron tubule formation
ISS
GO:0090090
negative regulation of canonical Wnt receptor signaling pathway
ISS
GO:0090103
cochlea morphogenesis
ISS
GO:0090184
positive regulation of kidney development
ISS
GO:0090190
positive regulation of branching involved in ureteric bud morphogenesis
ISS
GO:2000020
positive regulation of male gonad development
IDA
GO:2000138
positive regulation of cell proliferation involved in heart morphogenesis
IEA
GO:2000741
positive regulation of mesenchymal stem cell differentiation
IDA
cellular_component
GO:0005634
nucleus
IDA
GO:0005730
nucleolus
IDA
GO:0016585
chromatin remodeling complex
IDA
GO:0043234
protein complex
IDA
molecular_function
GO:0001046
core promoter sequence-specific DNA binding
IDA
GO:0001077
RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
IDA
GO:0001158
enhancer sequence-specific DNA binding
ISS
GO:0003677
DNA binding
IEA
GO:0003682
chromatin binding
IDA
GO:0003700
sequence-specific DNA binding transcription factor activity
IDA
GO:0003700
sequence-specific DNA binding transcription factor activity
IMP
GO:0003705
sequence-specific distal enhancer binding RNA polymerase II transcription factor activity
IDA
GO:0004672
protein kinase activity
ISS
GO:0005515
protein binding
IPI
GO:0008013
beta-catenin binding
IEA
GO:0034236
protein kinase A catalytic subunit binding
IPI
GO:0035326
enhancer binding
IDA
GO:0043565
sequence-specific DNA binding
IEA
Protein-protein interaction details for SOX9 (
Homo sapiens
)
(Information is obtained from BioGRID)
Interacting human protein
Experiment
Type
PubMed ID
NR5A1
Two-hybrid
physical
9774680
MAF
Two-hybrid
physical
12381733
MAF
Affinity Capture-Western
physical
12381733
MAF
Affinity Capture-Western
physical
12381733
MAF
Reconstituted Complex
physical
12381733
MAF
Reconstituted Complex
physical
12381733
NR5A1
Reconstituted Complex
physical
9774680
NR5A1
Affinity Capture-Western
physical
9774680
MED12
Two-hybrid
physical
12136106
MED12
Reconstituted Complex
physical
12136106
MED12
Reconstituted Complex
physical
12136106
MED12
Affinity Capture-Western
physical
12136106
HSPA1A
Affinity Capture-Western
physical
11356186
EP300
Affinity Capture-Western
physical
19828133
EP300
Affinity Capture-Western
physical
19828133
SCXA
Affinity Capture-Western
physical
19828133
EP300
Affinity Capture-Western
physical
12732631
CREB3L4
Reconstituted Complex
physical
12732631
SMAD2
Affinity Capture-Western
physical
15623506
SMAD3
Affinity Capture-Western
physical
15623506
EP300
Affinity Capture-Western
physical
15623506
RUNX2
FRET
physical
20593410