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Gene Protein Transcript Promoter Expression GO/PPI PubMed Cross reference

Expression information for UPF3B (Homo sapiens)
(Information derived after consensus based scoring of curated data)

Tissue/Sub tissueCondition/Sub ConditionExpression statusReliability scoreReferences
CervixCervical cancerTranscribed300
EndometriumEndometrial cancerTranscribed268
UterusNormalTranscribed70
UterusLeiomyomaTranscribed68
CervixNormalTranscribed52
EndometriumNormalTranscribed12
MyometriumNormalTranscribed12
UterusCIN/Cervical dysplasiaTranscribed10
UterusLeiomyosarcomaTranscribed6
EndometriumEndometriosisTranscribed2

NGS based expression information for UPF3B (Homo sapiens)
(Information from literature curation)

StudyConditionExpression status
Llorens et al. Multiple platform assessment of the EGF dependent transcriptome by microarray and deep tag sequencing analysis.
BMC Genomics 2011 Jun 23;12:326.
EGF treated
vs.
untreated control HeLa cells
Up-regulated
Lebedeva et al. Transcriptome-wide analysis of regulatory interactions of the RNA-binding protein HuR.
Mol Cell 2011 Aug 5;43(3):340-52.
ELAVL1/HuR knock down
vs.
mock knockdown HeLa cells
Not available
Yang et al. Genomewide characterization of non-polyadenylated RNAs.
Genome Biol. 2011;12(2):R16.
Poly A(-)
vs.
ploy A(+) RNA fraction of HeLa cells
Down-regulated

EST based expression for UPF3B (Homo sapiens)
(Information obtained from UniGene database)

UniGene cluster ID Tissue/Condition EST count Transcripts per million
Hs.103832Uterus938
Hs.103832Cervix00
Hs.103832Uterine tumor666
Hs.103832Cervical tumor00